Oncorhynchus gorbuscha (pink salmon): 124000110
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Entry
124000110 CDS
T07892
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124000110
03015 mRNA surveillance pathway
124000110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124000110
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124000110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
124000110
NCBI-ProteinID:
XP_046162207
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All DBs
Position
LG16:complement(1767506..1774052)
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AA seq
272 aa
AA seq
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MAPSPTKRKEEEKSKDRGKEKTATKEGGDKERGREKGHKRRSASTGSSSSSSSSSGSSSG
SSSGSSSSGTSRSGSSRSSSSSSSSSSGSPDPSRRRHDNRRRSRSASKTQKKGDDKERRR
RSPSPKPTKVHLGRLTRNVTKDHIQEIFATYGKIKMIDMPVERLHPNLSRGYAYVEFETP
EEAQKALKHMDGGQIDGQEITTSAVLAPRIRPPPRRQSPPRRMPPPPPMWRRTPPRMRRR
SRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcgtaaggaggaggaaaagtcaaaggacaggggaaaagag
aagactgccacaaaggaagggggggacaaggagagaggcagggagaagggccacaaacga
cgcagtgcatccactgggagcagcagcagctccagcagcagctctggctccagctctggt
tcctccagcggttctagttcctctggcaccagccgctctgggtcttcccggtccagctcc
tccagctcatctagttcctctgggtcacctgaccccagccgccgccgccacgacaaccgc
cgccgctcccgctccgcgtccaaaacacagaagaagggagatgacaaggagcgaaggaga
aggagcccgagccccaagcccaccaaagttcacttaggaagactgaccagaaatgtgacc
aaggaccacatccaggagatctttgccacctacggcaagatcaagatgattgacatgcca
gtggagaggctccacccaaacctgtcccggggctacgcctatgtggagttcgagactcca
gaggaggcccagaaggccctgaaacacatggatggtggtcagattgatggtcaggagatc
accacctctgccgtgttggctccaaggatacgccctccccctcgtagacagtcaccccca
cgcagaatgcccccacctccccccatgtggcgccgcaccccacctcgcatgaggagaagg
tctcggtcaccaaggagacggtccccggtgcgccgacgctccaggtccccggggcgcaga
cgtcatcgttcccgctccagttccaactcctcacggtag
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