Oncorhynchus gorbuscha (pink salmon): 124000192
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Entry
124000192 CDS
T07892
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124000192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124000192
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124000192
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124000192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
PHD_Oberon
zf-RING_UBOX
WWE_5
DUF6479
RING_XB3-XBAT31
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
124000192
NCBI-ProteinID:
XP_046162348
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All DBs
Position
LG16:45938094..45963600
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AA seq
627 aa
AA seq
DB search
MATASSSCVGRNVSRNGPSVSTPTSGAPGQSQPMVVVWEWQDDLGVWLPYSGQVSGYIEQ
CLSSPRGHRSGGPGSTSIWLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWVNDEGGWTPYETRTSILLEHSYQARQATADIVSHGYNYIVDLTALAQVNKA
TGYRRQVRRQGNLPYPLASGASVIHSGPACSCQQCLSHSSTGPMSSRSRHSFSSGQLSRP
SLQVPSRATGAHPTSVYSPYPRRPLSVGGMAWGSPWPLAPSASQLPGAQLALSTSANGLS
IPAIPVQLNGSTSVSSALAGIASILMSAVGLGVRFMTASSSAPPPPISSSRPAGSKSRSS
VRREKRQHRTVPAQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYDVASEGAQPIQP
GAVGKFKCGHTLHMLCMLAMYNNGTKSPAGSGKATDGSLQCPSCKTIYGEKTGTQPKGKM
EIYRVSQSLPGHPDCGTIQIIYSITHGIQGPEHPNPGQSYTSRGFPRFCFLPDNKKGRKV
LELLKVAWTRRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSE
LASQGVSDDCLLRQEDPSQGGASNSRL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctagctcctgtgtggggagaaatgtgtctagaaatggaccctctgtc
tcgaccccgacctcgggagcacctggacaatcacagcctatggtcgttgtatgggaatgg
caggatgatcttggcgtctggctaccgtacagcggccaggtgagcggctacatagaacaa
tgtttatcatctccgcggggacacaggagtgggggtcctggctccaccagtatctggctc
ggacaatcagatcccagtttgtcgccttatcttatagacataccaagcttgaagcagttc
cgccaagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggtgaatgacgaaggaggatggactccatacgag
actcgcacttctatcctactagaacacagctaccaggcacggcaggccacggcggacatt
gtctcacacggctataactacatagtggacctcacggcgctggcccaggtcaacaaggcc
acgggctaccggcgacaggtacgacggcagggtaacctcccctacccactggcatctggt
gcatccgtcatacactcgggcccggcctgctcctgccagcagtgtctgagccacagcagc
actggccccatgtccagccgctcgcgccattccttctcgtcggggcagctgagccggcct
agcctccaggtccctagcagggcgactggagctcatcccacctcagtgtactcaccctac
cccaggaggccactttctgtggggggaatggcgtggggaagcccctggccactggcaccc
tccgctagtcaactccctggagctcaactggccttgtccaccagtgccaatggcttaagt
atccccgccatccctgtgcaactgaatggatccaccagtgtgagctcagccctggcaggc
atagcctccattttgatgtcagcagtgggactcggcgtgcgcttcatgactgcctcctcc
tccgctcctcctccccccatcagcagcagcaggcccgcgggctccaaaagtcgcagctcg
gttaggagggaaaagaggcagcacaggacagtccccgcccagaaaccagaggatgtcatt
caccgctacatggaggaagttgcctctgctcaagacgaggactgcatcatctgtatggac
cggctgtcttgtccatcggattatgacgtggcgtctgagggagcccagcccatccagcct
ggcgccgtgggcaagttcaagtgtggacacaccctccacatgctctgcatgctggccatg
tacaacaatggtaccaagtccccagcgggctcgggaaaggccacggatggcagcctccag
tgcccctcatgcaagacaatctatggggagaagactgggacccagcccaaggggaagatg
gagatctatagagtctcccagtccctccctggccaccctgactgtggaactatccagatc
atttacagcatcacccatgggatacagggtccagagcaccctaatcccgggcagtcgtac
acctctagaggcttccctcgcttctgcttcctcccagacaacaaaaagggcagaaaggtg
ctggagctgctgaaggtggcatggacacggcgcctcatttttacggtgggaacgtccagc
accacgggcgagcctgatacggtggtgtggaacgagatccaccacaagacggagatgatg
tccaacgtgtcgggtcatggctacccggatcccaactacctggacaacgtgctgtccgag
ctggcctcccagggggtgagcgatgactgcctcctcagacaggaggaccccagccaggga
ggagcgtcaaactctagactgtga
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