Oncorhynchus gorbuscha (pink salmon): 124000248
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Entry
124000248 CDS
T07892
Name
(RefSeq) intraflagellar transport protein 56-like isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124000248
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124000248
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GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_16
TPR_2
TPR_14
TPR_6
Motif
Other DBs
NCBI-GeneID:
124000248
NCBI-ProteinID:
XP_046162445
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Position
LG16:complement(17714715..17728494)
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AA seq
582 aa
AA seq
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MILSRVKPAAVGGEIPVNKKAKEKKSPLVEDFLVQRDYLGAITLLEFQRNVGERGEDADL
WLAYCAFHLGDYKRAMEEYKALTDKPDCRPDVWVYLACTLFFLGLYKEAEEASRKAPKCQ
LQNRLLFHLAHKFNDEKQLMGFHQELEDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQN
RGKITETGEEDSDCLCRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSVPDSTIALNLK
ACNHFRLYNGKAAETELKNLIENSSSSFEFAKELIRHNLVVFRSGEGALQVLPALIDVIT
EARLNLVIYYLRQDDVQESYQLIKDLEPTTPQVQGSVSLNVHQRTEYILKGVVNAALGQE
MRSRDHLKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYND
DAFNFNYAQAKAAVGNYREAEEIFLLIQNDKNKSDYVYLSWLARCYIMNQKARLAWELYM
KMETSAESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQLIL
ASREPREALREVLPLLRHTGNPQVEYIIRILKKWAKDNRVSL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtccagagtaaagccagcagctgttggtggggagatcccagtaaataagaag
gcaaaagaaaaaaagtcaccacttgttgaagacttcctagttcaaagagactatctgggg
gccattacattgttggagtttcagcgcaatgttggcgaacgaggggaggatgcagacctg
tggttggcctactgtgctttccaccttggtgactacaagagagccatggaggaatacaag
gccctgacagacaaaccagactgccgcccagatgtgtgggtctacctggcctgtactctc
ttcttcctggggctttacaaagaagcagaggaggcttcacgcaaggcccctaaatgccag
ctgcagaatcgactactgttccacttggctcacaagttcaatgatgagaagcagctgatg
ggtttccaccaggagttggaggatgtgacagaggaccagctcagcctggcctccatccac
tacatgcgctcccactaccaggaggccatcgacatctacaaacgcatcctgctgcagaac
agagggaagataacggagactggagaggaggatagtgactgcttgtgcagagacttcctg
gccctgaatgtgtatgtggctctgtgctactacaagttggactactacgatgtgtcccag
gaggtgctggctgtttacctgcagagcgtcccagactccaccatcgctctcaacctcaag
gcctgcaatcacttcaggctctacaatggaaaagcagcagagacagagctgaaaaacctg
atagaaaactcctccagctcctttgaatttgccaaggagttaatccgacacaacctggtg
gtgtttcgtagcggggagggggccttgcaagtgctgcctgcactgattgatgtcattact
gaggctcgtctcaatctggtcatctactacctcagacaagatgatgtccaggagtcctac
cagctcatcaaagacttagaacccaccacaccacaggttcagggcagtgttagtcttaat
gtacatcagcgtacagagtacatcttgaagggggttgtgaatgctgcacttggacaggag
atgaggtcgagagatcatctgaagattgctcagcagtttttccagctggttggtggctca
gctagcgaatgtgacaccatccctggcagacagtgcatggcttcttgtttctttctactc
aggcagtttgaggatgtgctcatctacctcaactctgtcaagagttacttctacaacgat
gatgccttcaacttcaactatgcacaggccaaagctgctgttggcaactacagggaggca
gaggaaatcttcctgttgattcagaatgacaagaacaagagtgactatgtgtacctgagc
tggctggcacgctgctacattatgaaccagaaggcccgtctggcctgggagctctacatg
aagatggagacctcagcagagtccttcagcctcctgcagctcattgccaacgattgctac
aagatgggccagttctactactcagcaaaggcatttgatgtcttggagagattggacccc
aaccctgagtactgggagggcaaaaggggggcctgtgtgggtatctttcagctaattttg
gccagcagagaacccagggaggctttgagggaggtgctgcccttgctgaggcacactggg
aatcctcaagtggaatacatcatcaggattctgaagaaatgggccaaggacaacagggtt
tctctgtga
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