Oncorhynchus gorbuscha (pink salmon): 124000264
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Entry
124000264 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124000264
03021 Transcription machinery [BR:
ogo03021
]
124000264
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
124000264
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
124000264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124000264
NCBI-ProteinID:
XP_046162471
LinkDB
All DBs
Position
LG16:complement(11544484..11562038)
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AA seq
780 aa
AA seq
DB search
MILVRGSLHDPSSPHGYKTWFTPCSTTAERKFRVDRTVSRLKKVQMNGEMDASTKDQVWT
QDDLLNLLEAMKVNLPXKDLAKYKTSESHLDWEKVAFNSFTGEMCKQKWNEVSKVIRKFR
TLTELIFDAQDFIKNPYKGKKLKKHPDFPKKPLTPYFRFFIEKRAKYAKLHPEMSNLDLT
KILSMKYRGLPDKKKKKYLEDFQKDKETFGHSMSKFREDHPDLVESMAKKGSNVPEKPRT
PQQLWYSHEKKAFLKTHADATTKDIKDSLGKQWTQLSDKKRLKWIAKSLEMHKAYEEVMK
GFIETHPELNMSNEDIVKSTLTKAERHLKDKSDGRPDKPPPNGYSMFCAELMSSMKDVPS
TERMVMCSQQWKLLKQNEKDGYQKRCEQRKKEYEVEMNRFLCSISEEEQQRVLGEQKMIG
FKKGSGGSKKKSRAKPSPEKPKRPISAMFIFSEEKRPKLQQERPDLSDSELTRLLARMWN
ELSDKKKEKYKRLETVLKAESVKKGQEERSRLPDTPKTAQDIWQQSVIGDYLARFKNDRP
KAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELSEMRSPATIIASGKKMKFDGEPKK
PPSNGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRQPQKEKDRYKKIAEEKQKLYKVE
LERWLASLSSQERNVYKEYNSQKRKTPVKPGGTAAKVKAKIIKKSDTEDDDDEEEEKEAA
SSDNDSSSAEDSEEEDDDDDDDDNEEEDDDDEEAEDKENKSEGSSSSDSSSVETSDSDSD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggtgcggggcagtcttcatgacccatcctcgccacacggctacaaaacctgg
tttaccccgtgttcaacaacagctgaaagaaaattcagggtggatagaaccgtttcacgg
ttaaagaaagtacagatgaatggagaaatggacgcgtccactaaagaccaagtgtggacg
caggacgaccttctgaatctgctagaggccatgaaagtcaatcttcccnagaaggacctg
gccaagtacaagacgtcggagtcccatctggactgggagaaggtggccttcaactcattc
acaggagagatgtgcaaacagaagtggaacgaggtctccaaagtgatccgtaaatttcgc
acattaacagagctgattttcgatgcccaagacttcatcaagaacccgtataagggcaag
aagctgaagaagcatccagatttccctaaaaagcccctgacaccatatttccgcttcttc
attgagaagagggccaagtatgccaagctgcaccctgagatgagcaacctagacctcacc
aagatcctctccatgaagtacagagggctgcctgacaaaaagaagaaaaaatatctagaa
gacttccagaaagacaaagaaacgtttgggcacagcatgtcaaagttcagggaggaccat
cccgacctggtggagagcatggcaaagaaaggttctaatgtgccagagaaacccaggacg
cctcagcagctatggtacagtcacgagaagaaggccttcctcaaaacacacgcagacgcg
accaccaaagacattaaagacagtcttgggaagcagtggacacagctgtcagacaaaaag
agactcaagtggattgccaagtccctggagatgcacaaagcatatgaggaggtgatgaag
ggcttcattgagactcacccagagctcaacatgagcaacgaggacatcgtcaagtccacc
ctcaccaaggctgagagacatctgaaggacaaatctgatggcaggccagacaaaccaccc
ccgaatggttactccatgttctgtgctgagttgatgtccagtatgaaggacgtgcccagt
acagagcgcatggtcatgtgcagccagcagtggaagctgctgaaacagaacgagaaggac
ggctaccagaaacgctgcgaacagagaaagaaagaatacgaagtcgagatgaaccggttt
ctttgtagtatatcagaggaggagcagcagcgtgtgctgggggagcagaagatgattggc
tttaagaagggcagcgggggcagcaaaaagaagagcagagcaaagcctagcccagagaag
cccaaaaggcccatctcggccatgttcatcttctctgaagagaaacgtcccaagctgcag
caagagcgaccagacctgtctgacagtgagctcaccaggctgctggcacgcatgtggaac
gagctctcagataagaagaaggagaagtacaagcgccttgagacggtcctgaaggcagag
tctgtgaagaagggacaagaggagcgcagccggctgccagacacccccaagacggcacag
gacatctggcagcagagcgtcataggagactacctggccaggttcaagaacgaccggcca
aaagcccagaaagccatggaagccacttggaacaccatggagaagaaggagaagatcatg
tggattaagaaggcagctgaggaccagaaacgatacgagagggagctgagtgagatgcgc
tctcctgccaccatcattgcctcagggaagaagatgaaatttgacggtgaacccaagaaa
cccccttcgaatggctaccagaagttctctcaggagatgttatccaatggagagctgaac
cacctccctatgaaggagcgcatgggggagatcgggggccgctggcagaggcagccccag
aaggagaaggaccgctacaaaaagatcgctgaggagaaacagaagctgtacaaagtagag
ctggagcggtggctggcgagtttgtcctcacaagaaagaaatgtgtacaaggagtacaac
tcacaaaaaagaaaaaccccagtgaaaccaggaggcactgcagccaaagttaaggccaag
ataatcaagaagtcggacacagaggatgatgatgacgaggaggaagagaaggaggctgcc
tcatcagataacgattcttccagtgcagaggacagtgaggaggaagatgatgatgatgat
gacgatgataatgaggaagaagatgatgacgatgaggaggcggaggataaagagaacaag
tcggaggggagtagcagcagtgactcgagctcagtggagacatcggactctgattcagac
tga
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