Oncorhynchus gorbuscha (pink salmon): 124000289
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Entry
124000289 CDS
T07892
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124000289
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124000289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124000289
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124000289
Intermediate filaments
Intermediate filament-binding proteins
124000289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
124000289
NCBI-ProteinID:
XP_046162511
LinkDB
All DBs
Position
LG16:complement(65128349..65159106)
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AA seq
1601 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGDLYKDVGELGSLQGMCLPQRGSLEKGREGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRRARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLRLEAERRTVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLISEEKGMDEASTLQLLKEHLALEAMVENYAETVGML
SQQCQRQLELAHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEDVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRGQMLTASYQLHKFFTDCKEVLVQIAGKMRQLPEV
RACQASIANPATLQRLMRSFEHALQLLVSQVRQLQENAAQLRAIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREHLMWMEGIMGQIGGDDPRDSSSTEVMM
KQHGELKAKMDGRSKTLQQCVELGKILLATGNPAAEEIKDKLDTLLAKQKDLSERWDKHQ
EKLQRKKDQFQYAQETVTAEAWLKAKEPLINSSSNSREAGGAGGEAQAQTDEVEQLILRH
EAFRKAAATWKERFSSLRQLSNAEKLREEQSSKPTPTPLSSRRMFPSSCLTPTFPLATST
LLRQTVQLHIEPRPKQTSLGMAASASTAAQRLGSTMASYTPVMNGSSYHGLDHQSSSGGL
ESSNYPGLNHQACGGVDSSSSYLGVNHQTAPPPVDSSGYLGLNHQSSPGYLPQNQSSGGM
GSPGYLPQNQSSGGMGSLGYLPQNQSSGGTGSQGYLPQNQSSGGLGSSGYLPQNQSIGGI
VSPGYLAQNQHSGGMGSSGYLAQNLSSGSMGSSGYLAQNHQSSGGMGSSGYLAQNQGSGV
MGSSGFLAQNQCSGIMGSSGYLAQNQNSGGMGSSGYLAQNLSSGGMGSSGYIAQNHGSGC
MGSSGYLAQIQGSGGMGSSSYLPQSGGVMDPKMAYAWQHLKADCMQPRINHIHKAVNPLL
EASRAQREQFGDIPMVDMIGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQT
SSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTPRQDDSSDMESAKEGSDK
RLTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRRRPRPK
ELEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEGQQKSPSSKSWVNLYCVLSKG
EIIFYKDAKSITTPYNEETPLDLSVCICDSTMGYKKKKNVFVIKKNDGNDYIFHAKDEED
LKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGGEEEEE
RSEKGEGSEKTGEGSEKADTSERGEMAEGGAGGSSTSGKSK
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcaccggaaa
tggctgaagcaccaggccttcatgaccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggtcaggaactgattgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagccccctcagctggagcaggctcaccatctg
cccaccttcaatgagcagcttcataaattccagtctcagatgggggacttgtacaaggac
gtaggggaactagggtccctccaggggatgtgtctcccccagcgaggcagcctggagaaa
ggcagggaaggagaagggggcgagcagccagctgtggtggagacccgcatcgtgcgcctc
atcgagcccctgaaggagagacgtcgcattctgctggcctccaaggagatgcatcaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcttcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacgctg
cagagagatctgcagggtcgccgggcgcgggttgaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccccgaggtggactttgtgcgcgagggggcagggcacgtgcgt
cagctttgggaggtgctgaggctagaggcggagaggaggactgtgatgctggatgtggtg
ctgcaggcccagcagtattacagcgaggcggccaaagtcgagtcctggctggcaggccag
aaactgcacctcattagcgaggagaagggtatggacgaagcaagtaccctgcagctgctg
aaggagcacctggccttggaggcgatggtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagaggcagctggaactggcacacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtacgtgtctctgaaggacatggtggagcacaggaag
accaaactggagcagcagtattggatgtaccagctcaacagagaggtggaggagttagaa
aagtggatcactgagcgggaggccgttgccagctccactgagctgggccaagacctggaa
gatgtcacgatgctacaagaaaaattcaccaagttctgctcagagaccaacagcataggc
caacagaggatggagcaggtgaataagatggtgaacgagatgatagactgcggccacacg
gacgcggccacaatcgctgagtggaaggatggactgaacgagtcatgggccgacctactg
gagctcatggaaacccgaggacagatgctaacagcatcataccagctgcacaagttcttc
accgactgcaaagaggtcttggttcagattgcggggaagatgaggcaactaccagaggtg
agggcgtgccaagccagcatcgccaacccggccacgctgcagaggctcatgcgctctttt
gagcacgccctccagctgcttgtctcacaggtaaggcagctgcaggagaacgcggcccag
ctgagggccatctacgccggggaaaaggcagaggccatcatgagcaaggaacaggaagtg
atgtcagcatggaaggagttgctggtttcctgtgaggccagtcgcgtgcaggtcacctcg
gtgacagacaaggtccagttcttctcagtggtgcgtgagcatctcatgtggatggaaggc
atcatgggacagattggaggggacgaccccagggattcgtcctctacggaggtgatgatg
aaacaacatggtgagctgaaagccaagatggacggccgcagtaagaccctacaacagtgt
gttgagctgggaaagatcctgttggccacaggcaacccagcagctgaggagataaaggat
aagttggacacactcctggctaagcagaaggatctctctgagagatgggacaaacaccag
gaaaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgacggcggag
gcctggctgaaggccaaggagccgctaatcaactctagctccaactccagggaggctggg
ggtgctggaggagaggcccaggctcagactgacgaggtggagcagctcatcctccgccac
gaggccttccgtaaggctgcagctacctggaaggagcgcttcagctcactgagacagctc
tccaacgcagagaagctgagagaagaacagagcagcaagcctaccccaacaccactctcc
agtcggaggatgttcccatcatcctgcctcactccgacctttccccttgctacctcaact
ctgctgaggcagacggtccagctgcatattgagcccaggcccaagcagactagtctgggg
atggctgcctctgcctccactgcagcccagaggttgggttctaccatggccagctacact
cctgtcatgaatggctccagttaccatggactggaccatcagagcagcagcggggggttg
gagagttctaactaccctgggctaaaccatcaggcctgtggaggtgtggacagcagctcc
agttaccttggagtgaaccatcagactgcccccccgccagtggatagttctggctacctt
ggactgaaccatcaaagtagtccaggctacctacctcaaaatcaaagtagtgggggtatg
ggtagtccaggttacctgccgcaaaatcaaagcagtgggggtatgggtagtctaggctac
ctgccgcaaaatcaaagtagtgggggtacgggtagtcaaggctacctaccgcaaaatcaa
agtagtgggggtttgggtagttcaggctacctcccgcaaaatcaaagtattggtggtata
gttagtccaggctaccttgcgcaaaatcaacacagtggaggtatgggtagctcaggctac
cttgcacaaaatctaagtagtgggagtatgggtagttcaggctacctggctcaaaaccat
caaagcagtggtggtatgggtagttcaggctacctggctcaaaaccaaggtagtggggtt
atgggtagttcaggcttccttgcgcaaaaccaatgtagtggaattatgggtagttcaggg
taccttgcgcaaaatcaaaatagtggtggtatgggtagctcaggctaccttgcacaaaat
ctaagtagtgggggtatgggtagttcaggctacattgcacaaaaccatggtagtgggtgt
atgggtagttcagggtaccttgcgcaaatccaaggtagtggaggtatgggtagttctagc
tatctgccacaaagtggtggggtcatggaccccaaaatggcatatgcgtggcagcatctg
aaagccgactgcatgcagcccaggatcaaccatatccacaaggctgtcaaccccctcctg
gaggccagcagggcacagagggaacagtttggggacatccccatggtagacatgatcgga
ccagagtccggcctggagctcctccatggcaggcttcaaagggacccccgcggcagccgc
tctgacccccagatggaccacctgcggcgggagagggagtacaagctgggccgccagacc
tccagcgaacaggagatccaggcgcggctcaacgagctgccaatgatcgtgcgtcaggag
cgctataggcgacgcctggagaggcagtcgtccagcgagcaggagggcagtgggaaggcg
aggacaccaaggcaggacgactccagcgacatggagtcagccaaggaaggctctgacaaa
cgcttaacagagaagagagccaccaccatggctgagattgtggagcaggcccaggagaga
gaggcagcacaagccagaggggagacataccgccccaccagcagcctctcagcacccgtg
acatacgagcgcccgcgcgcccgagaccgccccaaaccccgcaggagaccccgccccaaa
gagcttgaggagaagcggcgctctcgctccgctccagcccagagtccggcgcaactcttg
ccgccctcacacactgcccataacgaaggcttcctgtaccgcaaacacgactttgagggc
cagcaaaagagtcccagcagtaagtcgtgggtgaacttgtattgcgtgttgtcaaaagga
gagatcattttctacaaggacgccaagagcatcaccacaccttacaatgaagaaacccca
ctcgacctgagcgtctgtatatgtgatagcaccatgggatacaagaagaagaaaaatgtc
ttcgttatcaaaaaaaatgatggcaatgactatattttccatgcaaaggatgaggaggac
ctgaaggcttgggtcactaacatcaccaccagtataactgaacacgaggagatcgccaag
tgggacaaacccacgacctcgtccacagatcccgaccgctcggagaggaaagagaagtca
gagggtgacgcagatgccaggtcagagagatctgagatgggaggagaagaggaggaagag
aggtctgagaagggagagggctccgagaagacaggcgagggctccgagaaggcagacacg
tcggagaggggtgagatggcagagggaggggcagggggctccagcacgtcagggaagagc
aaatga
DBGET
integrated database retrieval system
