Oncorhynchus gorbuscha (pink salmon): 124000343
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Entry
124000343 CDS
T07892
Name
(RefSeq) DNA-3-methyladenine glycosylase-like isoform X1
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124000343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124000343
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
124000343
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124000343
Prokaryotic type
124000343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
124000343
NCBI-ProteinID:
XP_046162588
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All DBs
Position
LG16:complement(22018598..22025759)
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AA seq
269 aa
AA seq
DB search
MSGRKRTQISVPESEDQVKKCVSLRQVRSTDHESGDVKPGTVKSQYFSKEGDPQRLGEEF
FNQPCISLAKAFLGKVLVRRSADGTELRGRVVETEAYLGGEDKASHSAGGKCTERNTAMF
MKPGTIYVYPIYGIYLCMNVSSQGEGAAVLLRALEPLHGLPLMRQLRTARRREGARPLKD
KELCNGPSKLCQALDIPRFFDRRDLASEPEVWLERDPQIGPQEPGLREVVSASRIGIDSH
GEWATKPLRFYLRGHHCVSVVDKQAETES
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacgaaagaggacgcaaatatccgtacctgagtccgaggaccaagtaaaaaag
tgcgtgtcactgagacaggtgaggtctaccgaccacgagagcggtgatgttaaaccaggg
acagtgaagagtcagtacttctccaaggagggggaccctcaaaggcttggagaagagttc
ttcaaccagccctgtataagtttggctaaagcattcctaggcaaggtattggtgcgtcgg
agtgcggatggcactgagctgagagggagggtggtggagactgaggcctacctgggagga
gaggacaaggcctctcactctgctgggggaaaatgcactgagaggaacacagcgatgttt
atgaaacccggcaccatctatgtgtaccccatctacggcatctacctctgtatgaatgtt
tccagtcaaggggagggtgctgccgtgcttctgcgggctctggagcctctacatggcttg
cctctaatgaggcagctgcggacagccaggcggagagagggggcccggcccctgaaggac
aaggagctatgcaatggtccctcaaagctgtgccaagccctggacataccacgcttcttc
gaccggagagacctagcctcagagccagaggtgtggctagagagggacccccagatagga
ccgcaagagccaggcctcagggaggtggtctcagcaagccggatcggcattgactctcat
ggggaatgggccaccaaacccctgcgcttctatctgcgtggtcaccactgtgtgagtgta
gtggacaaacaggcagagacagagagttga
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