Oncorhynchus gorbuscha (pink salmon): 124000390
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Entry
124000390 CDS
T07892
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124000390
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
124000390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med25_VWA
Med25
VWA
Motif
Other DBs
NCBI-GeneID:
124000390
NCBI-ProteinID:
XP_046162667
LinkDB
All DBs
Position
LG16:13255847..13270336
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AA seq
753 aa
AA seq
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MDLPIKPGANQVADVVFVIEGTANLGPYFESLRKHYILPAIEYFNGGPPAETDFGGDYGG
TQYGLVVFNTVDCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLSVALQ
LFDDFKKMREQIGQTHKVCVLLCNSPPYLLPAVESVSYTGCTADNLVKIIRDRGIHFSVV
SPRKLPALRALFDRASPVGGQVDPHPDYSQDPFHMILVRGISLPVSSGGGSGLLKPILPP
QPLPVSQPPLGPTSQAPPPISTAHPYQPPPSLNAAQAAAQMAVEAANNQKSRFPGMVNPG
PPFSGQSTLPSVAGVKLAPSSQPSLSTVTIVSTPMLPQQQVPPPQQQQVQPPGQPQPNQQ
QSVPPQQQQPTANQQTPPSSQPGMPGVSAAQANPIGGQQQGVANKIVAWSGVLEWQEKPK
ASSMDSNTKLTRSLPCQVQVNQGENLNADQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQF
LFTNKDVESLKGLYRIMATGFAGCVHFPHSAPCEVRVLMLLYSSKKRIFMGLIPNDQSGF
VNGIRQVITNHKQVQQHRSLGSGGPMPGPPGQVQPNQNFLNRPQGPIPVSHGNVQQQSVV
VGMPSVSQVTLMEEQQRQANLMTMRASGAPNQQPPVTGAPPNQVAQGGQAPPQGAMLRLP
NPGANPQLRSLLLSQQQPQGGVGHMQGMMPHQGLGGQLVHPTPGAGPQMQAQWRQPLAGQ
MMMAAGQRGPGAQPPGMPQVSSVMEDEILMDLI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcccattaaacctggcgccaatcaagtggcagacgtggtgttcgtcatcgaa
ggaactgcaaacctcggcccctattttgaatccctcaggaaacattacatactacctgca
atcgagtacttcaatggaggccctccagcagagacagactttggaggagattatggaggc
acacagtatggtcttgttgtgttcaacacagtggactgtgctcctgaatcctacgtccag
tgtcacgcaccaaccagctcagcctttgagtttgtctcgtggattgacagcatccagttc
atgggaggaggagcagagagctgtagtctcatcgcagagggtctgtctgtggccttgcag
ctctttgatgacttcaaaaagatgagagagcaaataggtcagacacacaaagtatgtgtg
ctgctgtgtaactctccgccatacctgctccctgccgtggagagtgtcagctatacgggc
tgcactgcagacaatctggtcaagatcatcagagatagagggattcatttttctgtggtg
tcgccacggaaactgccagcgttacgggcactgttcgacagggcgtcaccagtcggggga
caggtcgacccccacccagactacagccaagaccccttccacatgatcctggttaggggt
atctcacttcctgtgtcatcagggggaggatcgggccttctcaaacctattctaccccct
caacccctgcctgtcagtcagcctcctcttggtcccacctcgcaggctcctccaccaata
agcacggcccatccatatcagcccccaccttcccttaacgcggcccaggcagctgcacag
atggctgtagaggcagccaacaaccagaagagtcgcttcccaggcatggtcaatcctggt
cccccattcagcggtcagtcaactctcccatctgtagcaggagtgaagttggctccctcc
agtcagcccagcctgtccacagtcaccatagtttccacacccatgttgcctcagcaacaa
gtccctcccccacagcagcaacaagtccagccgccaggacaaccacagcccaatcagcag
cagtcggtgccccctcagcagcaacagcccacagccaatcagcagacgcccccatcctca
cagcctggcatgccaggtgtgtctgcagcccaggcaaatccgattggggggcagcagcaa
ggcgttgccaataagattgtagcatggagtggggtactggagtggcaagagaagcccaaa
gcctcgtctatggattccaataccaaactcactcgctccctgccctgccaggtgcaagtc
aaccaaggagagaacctaaatgccgaccagtggccacagaagctcatcatgcaattgatc
ccacaacagctactgacaacactcggtcccctcttcagaaactctagaatggttcagttt
ctcttcaccaacaaagatgtggagtcactaaaaggtctttatcgtatcatggccactgga
tttgcggggtgcgtccacttcccccacagcgccccctgtgaggtgcgggtgctcatgctg
ctctactcctccaagaagaggattttcatgggcctcatccccaacgaccagagtggcttc
gtcaacggcatccgacaggtcatcaccaaccacaaacaggtccagcagcaccgctcgtta
ggttcaggagggccgatgccagggccacctggccaggttcaacccaatcagaacttcctc
aaccggccgcaggggcccatccctgtctcccatggcaacgtgcagcagcagtctgtggtg
gtgggcatgccctctgttagtcaggtcactctgatggaggaacagcagagacaggccaac
ctgatgacgatgagagcatcaggcgcacctaatcagcagccgcctgtcacaggtgctccg
cccaaccaggtcgctcagggtggacaggccccgccccagggtgccatgctccgccttcca
aacccaggagccaatccgcagctgcgcagtctcctcctcagccaacagcagccacagggg
ggtgttggtcacatgcagggcatgatgcctcaccaggggctgggagggcagctggtccac
cctactccaggagcgggcccccaaatgcaggcccagtggagacagcccctggcaggtcag
atgatgatggctgctggtcagaggggccctggagcccagccccccgggatgccccaggtg
tcttccgtcatggaggacgagattctcatggaccttatttga
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