Oncorhynchus gorbuscha (pink salmon): 124000422
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Entry
124000422 CDS
T07892
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124000422
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124000422
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
124000422
NCBI-ProteinID:
XP_046162726
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Position
LG16:67706976..67714607
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AA seq
1146 aa
AA seq
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MENLTPEQWREIVNKKMRFPLELISAIQEGNIVMVCGLLNTGDGIIRQLDDSEDRLWREA
LNLSIRLGNEDTMDALLQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSLAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHIIPRPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFGLSRELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLTRLRLAVNCN
QKQFVAHPICQQVLSSIWCGNLSGWRGSKTAWKLLVSVGIFFTMPLLCLVYWIAPKSKVG
KILKIPVIKFLLHSASYMWFLITLLGESITMELYRDQFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCMDMMVLSMYLASFTLRVLIMLKGHFLCQAPDGTEECAYF
TQTVRQDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVTQPYLGRFNETFRFLFWTMFGVANQDYVDMPEFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYLIRGIFRQICCCCTLNSTPDYPPITSMSNGKEVDGGGSGENQIPYRQ
QVIRALVQRYIESERRKFEETKRKDVGNRITELNKVVGRLHAEMKAIMQVLVDSGQAAGD
IPNTDGSSILGKYIMGAKNNFRGFDNRLDNKHTPLQVTVEVGQQGKVAEEKAGAVVMLDD
KGMEVEHDRKVEIGKDGRTAMGLDKTVEMEKEAKDGGMVVKQEVKVDVGLDGAEGTKQVG
DMDVVKMEEGRADGRKGERRVEDVVKESEQNMENGGKGEVRVEEMVKETEHKMERRGNSD
GKGEKGINKARTNEMVEKRVEGEASKAEVRMEVKDKGKKVDSSVDNTIRDKGVVGGDKTV
NEMGGCGNEGKVDMGLEDVKEVERKVKAVELKEKRVVGKINVAERWNKGEGRAVEENVTE
RKAAKAGMVVVENTARAGVNILGEKVVPSPTGSSSSQDTGFGSQEGEGSINGGPMRPAYL
SASSPD
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacaccggagcaatggcgggagatagtgaacaagaagatgcgcttccct
ctggagctgatcagtgccatccaggaggggaacatagtgatggtgtgtggcctgctgaat
actggtgacggtatcatccgccagctggacgactccgaggaccggctgtggagagaggcc
ctgaacctgtccatccgcctgggcaacgaggacaccatggacgccctcctccagggcatc
aagtttgacttccgccagatccatgaagctctgctggttgccgtggacaccaaccagccc
cgcgtggtgaaaaggctcctcgaccgcctggaccaggagaagggcaacaagatggatgtg
cgatccttctccctggccatcttcgaccactctatcgacgactcgcagttcgccccaggc
gtgaccccgctgaccctggcctgtcagaaggacctgtatgagattgtcaccatgctgacc
cagaagggccacatcatcccaaggccacacaagatctcctgtgcctgtctagagtgtagg
aacggacgccagtatgacctgctgaagttctccctgtctcgcatcaacacctaccgtggc
attgccagccgggcctacctgtccatcacctcagaggatgccatgctcagtgccttcggc
ctcagcagggagctacgcaaactctccaagaaggaacccgagttcaagcctcagtacttg
ggtctggaggagctgtgccaggagtttgcggtggagctgctggggatgtgccgtaaccag
agtgaggtcaccaccatcctgaacagctgtggagatgaaagccaggacgcccttgaccag
caggccttcgaggagggcatccccaacctgacccgcctaaggcttgctgtcaactgcaac
caaaaacagtttgtagcccaccctatctgccagcaggtgctgtcctctatttggtgtggg
aacctgtctggctggagaggcagcaagacggcctggaagctgctggtgtctgtgggtatc
ttcttcaccatgcccctcctctgcctcgtctactggattgcacccaagtccaaggtggga
aagatactgaagattccggtgatcaagttccttcttcactctgcctcctacatgtggttc
ctcatcacattgttgggagagtccatcaccatggagttgtacagagatcagtttgcttca
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggtcgggttcttctgg
tatgaatgtaaggaggtgtggattgaaggtctgcggagctacttcctggactggtggaac
tgcatggacatgatggtgctcagcatgtacttggcctccttcactctgcgtgtcctcatc
atgctcaaaggtcacttcctgtgccaggcccctgacgggactgaggagtgtgcctacttc
acccagactgtgcgccaggactggcatcaggaggacccccagctcatagctgaggtactg
tttgcagtgaccagtatgctgagcttcacccgcttggcctacatcctgcctgcacaggag
tccctgggtacactccagatctccatagggaagatgatcgatgacatgatgaggttcatg
ttcatattgatgattattggaactgctttcctctgtggtatcaataacatctatgttcct
tatgtcacccaaccatatctcggaaggtttaacgagacctttcgtttcctgttctggacc
atgtttggggtggccaaccaggactatgtggacatgcccgagtttgtggttgcagagttt
gtgggcagaatcctttacggcatcttcaccctggtgattgtgatcgtgctactcaacatg
ctcattgcaatgatcaccaactccttccagaagattgaggatgatgctgacgttgagtgg
aaatttgcccgatccaagctctatctgagttacttccgagaaggtctcactatgcctgtc
cccttcaacatcatcccctcacctaaggcctttttctacctcatacggggtatttttcgt
cagatctgctgctgttgtactttgaactcgacaccagactatccccccataacctccatg
tcgaacgggaaggaggtggatggtggagggtcgggggagaaccagataccttatcgccag
caggtgatacgggctctggtgcagcgctacattgagtctgaacgtcggaagtttgaggag
accaagagaaaagatgtgggtaatcggatcacagagctaaacaaggtggtgggaaggctg
catgctgagatgaaggccatcatgcaggttctggtggactctggccaggctgcaggagac
atccccaacactgatggctcctccatcctggggaaatacataatgggagccaagaacaac
ttcagggggttcgacaacaggctggacaacaaacacacacctctacaggtgactgtggag
gtgggacaacagggaaaagtagcggaagagaaggctggagcagtggtgatgctagatgac
aaagggatggaggtggaacacgacagaaaggtggagataggaaaggatggaaggacagca
atgggactagacaaaacagtggagatggaaaaggaggcaaaggatggagggatggtggtc
aaacaggaagtaaaggtggatgtgggcctagatggagcagaggggacgaaacaggtagga
gacatggatgttgtgaagatggaggaggggagagctgatggaaggaagggagagagaagg
gtggaggacgtagtgaaggagtcagagcagaacatggaaaatggaggaaagggagaggta
agagtggaagaaatggtaaaggagacagagcacaagatggaaaggagaggcaacagtgac
gggaagggggagaaggggataaataaggcacgcaccaatgagatggtggagaaaagggtg
gagggagaggccagtaaggcagaagtgaggatggaagtgaaagacaaagggaaaaaggta
gatagcagtgtggataatacaatcagggacaaaggagttgtaggaggtgacaaaacagtt
aatgaaatgggaggatgtgggaatgaaggtaaagtagacatgggattggaagatgtgaaa
gaggtagagaggaaggtcaaagcggtggaactaaaggagaaaagagtggtggggaagatc
aacgtggcagagaggtggaataagggggaggggagggcagtggaggagaatgtgactgag
aggaaggctgccaaggctggcatggtggtggtggagaatactgccagggctggggtgaat
atcctgggggagaaggtggttccttccccgaccggcagcagcagctcacaggacactggc
ttcggctcacaagaaggggaggggtccatcaatggaggaccaatgagacccgcatatctg
agtgcatcatctccagattag
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integrated database retrieval system
