Oncorhynchus gorbuscha (pink salmon): 124000438
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Entry
124000438 CDS
T07892
Symbol
cntnap3
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124000438 (cntnap3)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
124000438 (cntnap3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
PMP1_2
CatAgl_D1
Motif
Other DBs
NCBI-GeneID:
124000438
NCBI-ProteinID:
XP_046162745
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All DBs
Position
LG16:complement(83488176..83714376)
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AA seq
1337 aa
AA seq
DB search
MIALLRQHHFVLNMDLRTRRHSGMILQLAVLLWCSHGAIGKDSCDGPLVSNLPQSSFRSS
SQLSNSHGPGFAKVNRRDGAGGWSPVESNKYQWLEVDLGERTEITAVATQGRYGSSDWVS
SFLLMFSDTGCNWKQYRQEDNIRAFTGNSNADSVVQFKLQQPVFARFLRLLPLDWNPNGR
IGLRLEAYGCPYKSDVARFDGSSCLLYRFSPNPTSSQTAKDTISLKFKTLQNSGTLIHTE
GQDDHTITLELHKGKLLLHLRKDKSVSPGPESHLIVSLGSLLDDQHWHHVAIERFSGHLN
FTVDKSSQQIQVPAELSPSEINEISYGGVQCHGSQRVMSRRNFHGCLENLLWNDVNVIDL
AKKQQQVSITGNVTFTCAEPVSVPVTFAGAQSFLQLPGAAQQQRDGRGVAVAVVGMAISL
QFRTWNRAGLLLTFDLQQQAGSLWLYLSEARVRLQIHKAGRYTILVDVTAGFGLNDGQWH
SVDLTARRGHLTITVDKEEDSTAHASPSFPVVSGNNLFFGGCPDSEYNQECRNPFNVFQG
CMRHIHVDNNAVDLIKVQQMLIGNYSDLQIDMCGIIDRCSPSHCEHGGRCTQSWSTFHCN
CSNTGYSGATCHSSVYEKSCEAYKHQGNTSGLYYIDVDGSGPIKSQLIYCNMTDKTWLVI
QHNNTELTKLKASSGINQHLAYFNYSADAEQLWAIITQAEHCEQEVLYHCRKSLLLNTPD
GSPFTWWVGRTDEPQTYWGGAVPGSQQCGCGLQGNCIDSDHYCNCDADRKEWATDSGLLT
HKENLPVRWVVVGDIQRPGSEAAYKVGPLKCHGDKNFWNAAFFNKETSYLHFPTFHGELS
ADISFLFKTTAASGVFLENLGIKDFIRVELSSPTEVVFSFDVGNGPFEVRVETGDVALND
DRWHRVRAERNVKEASLRVDAFPNATQKAPADGHIHLQLNSQLFVGGTASRMKGFLGCIR
SLQLNGRTLDLEERAKITPGVRPGCPGHCSSYGELCQNQGKCVEMYNGFSCDCGLSAYAG
PFCQREVSADFKPGTSVQYTFKEPYELNRNISTQSSSIYSDLKLRGENVSFSFRSSQSPA
LLLYVSSYYREYLAVLLNRNGYLDVKYKLQNSRDAEVFRTSVKNLANGQLHRVSIRRLSE
TVSVQIDQHEREDFNLTSDAEFNAIKSVVLGKVHESGELDPEIARLNSQGFSGCLSVVQF
NSVAPLKAALLSPNTSPVIVIGSLEESTCGSLSPANPYPAETTHSLSDHLGTVGTGELIV
NAIKSDSALIGGVIAVVIFVILCALAIMARFLYRRKETFHTQEPQGIKPEADSPEYPFHS
EPNSQNILSENQKEYFI
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctctcctccggcagcatcatttcgttttgaacatggatttgaggaccagaaga
cacagtggaatgattttacagctcgccgtccttctctggtgttcacatggggcaattgga
aaagacagctgtgatggcccactggtgtccaacctgccccagtcctccttcagaagctcc
tcacagttatccaacagccatgggcccggctttgctaaagtcaacaggagagatggtgct
ggaggctggtctcctgtggagtctaataagtaccaatggttggaggtggacctgggggag
cggacagagatcacagccgtggccacgcagggtcgctatggcagctcagactgggtctcc
tccttcctcctcatgttcagcgacacgggctgcaactggaaacagtaccgccaggaggac
aacatccgggcgttcacagggaacagtaatgcagacagtgtggtgcagtttaaactgcag
cagccagtcttcgccaggttcctgcggttacttcctctagattggaaccccaacgggagg
ataggtctgagactggaagcctatggatgcccatacaagtctgacgtggcaaggtttgac
ggcagcagctgcttgctctacaggttcagccctaacccaacatcaagtcaaacagccaaa
gacaccatctctctgaagttcaaaaccctgcagaactctgggaccttgatacacacagag
ggacaagatgatcacaccatcacactggagttacacaaaggaaaacttttactccatctc
agaaaagataaaagtgtctctcctggtcctgagagccacctgattgtgtcactgggtagt
cttctagatgaccagcattggcaccacgtagccatcgagcgctttagtggccacctcaac
ttcactgtggacaaaagctctcagcaaatccaggttcctgcagaactcagtccttccgag
ataaacgagattagctatggtggcgtccagtgccatggaagtcagagggttatgtccagg
aggaacttccatgggtgccttgagaacctgctctggaacgatgtgaacgtgatagatctg
gccaaaaagcaacagcaggtctccatcacgggcaatgtgacctttacatgtgctgagcca
gtctctgtccccgtgacgttcgccggcgcgcagagttttctccagttgccaggggcagcg
cagcagcagagagatggccgcggggttgccgtggcggtggttggcatggcgatcagcctg
cagttccggacctggaatagagcaggccttctgttaacctttgacctccagcagcaggcg
ggaagcctgtggctctacctgagtgaggccagagtcaggctgcagatacacaaggctgga
agatacacaattctagtggacgtaactgcaggatttggtctgaacgatggccagtggcat
tcagtagacctaactgcaaggagaggtcatctgaccatcactgtggataaagaggaagac
tccacggctcatgccagcccatctttccccgtggtatcaggaaacaacctcttctttgga
ggttgcccggacagtgagtataaccaggagtgcagaaaccccttcaacgtgttccaaggc
tgtatgagacacatccatgtggataacaatgctgtggatctcatcaaggtacaacagatg
ctgataggaaactacagcgatctccaaatcgacatgtgtggaatcatcgacagatgctct
ccaagccattgtgaacacggggggagatgcacccagtcttggagtaccttccattgcaac
tgttcgaacacgggctacagtggagcaacatgtcacagctctgtctatgagaagtcatgt
gaagcgtataaacaccagggtaacacatcaggcctgtattacatagatgtggacggaagt
ggtccaataaagtcacagctgatctactgcaacatgacagataaaacatggctggtgatc
caacacaataacacggagctaaccaaattaaaggcctcatctgggataaatcagcattta
gcctattttaactattctgccgacgcggaacagctctgggccataattacccaggcagag
cactgcgagcaggaagtcctctaccactgcagaaagtcactcctcttaaacacaccagat
ggatctccgttcacctggtgggtgggtcgtacagatgaaccccagacgtactggggtggg
gcggtaccagggagccaacagtgtggctgtggtcttcaggggaactgcattgactcagac
cactactgcaactgtgacgctgaccgcaaagaatgggcgactgactctggtctgctcacc
cataaggagaatctgccggtcagatgggtggttgttggggatatacagagacctggatca
gaggcagcctataaagtcggaccactcaagtgtcatggtgacaagaacttctggaacgca
gcgttcttcaacaaagagacttcatatctgcacttccccacgttccacggagagctgagt
gcagacatctccttcctgttcaaaaccaccgctgcttcaggagtcttcctggaaaacctg
ggcatcaaagacttcatacgggttgaactcagctcgccgacagaggtggtcttctcgttt
gacgtgggcaacggcccctttgaagtgcgggtggaaacaggcgatgtggcactaaacgac
gacaggtggcaccgtgttcgagcggagcgaaatgtaaaagaggcttcgctgcgtgtggac
gctttccccaacgccacacagaaggcccccgccgatggtcacatccatctgcagctcaac
agccagttatttgtaggtggcacagcctccagaatgaaaggcttcctggggtgtatccgc
tcgctgcagctgaacgggaggacactggacctggaggagagggccaagatcacgcccggg
gtgagaccgggctgcccgggacactgcagcagctacggggagctgtgccagaaccaaggg
aagtgcgtggagatgtacaacggcttctcctgcgactgtggcctctcagcctatgcaggc
cccttctgccagagagaggtctcggctgacttcaaacctgggacatcggtccagtacaca
ttcaaggagccgtatgagctgaacaggaacatcagcacccagtcctcctccatttactct
gacctcaagctacggggagagaacgtgtcattcagcttccgtagctcccagagtcccgcg
ctgctcctctacgtcagctcctactatagagagtacctggctgtgctgctcaataggaat
ggttacctggacgttaaatacaagctgcagaacagtcgagatgctgaggtgttcaggacc
agcgttaagaacctggccaacggacaacttcacagagtctccatcagaaggctttcagag
actgtcagtgttcagattgaccagcacgaaagggaagacttcaatctcacatctgatgca
gaattcaatgctatcaagtcagttgtcctggggaaagtgcatgagtctggtgagctggat
ccagagattgccaggctgaactcccaaggtttcagtggctgtctgtcggtggtccagttt
aactccgtagccccactgaaggcagcgctgctttcccccaacaccagcccagttatagtg
attggatccctagaagagtccacctgtggctctttatctccagccaatccctacccagct
gaaactacacactccctatcagatcatttaggtacagtaggtactggtgagcttatagtc
aatgcaatcaagagtgactctgcattgattggaggtgtgattgctgtggtgatatttgtg
attctgtgtgcgttggcaataatggcaaggttcctgtatcgacggaaagagacattccac
acccaagaaccccagggaatcaaacctgaggccgacagtcctgaataccctttccacagt
gagcccaactcacagaacatactaagtgaaaaccaaaaggagtatttcatataa
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