Oncorhynchus gorbuscha (pink salmon): 124000439
Help
Entry
124000439 CDS
T07892
Name
(RefSeq) amyloid protein-binding protein 2-like isoform X1
KO
K25806
amyloid protein-binding protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124000439
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124000439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
124000439
NCBI-ProteinID:
XP_046162748
LinkDB
All DBs
Position
LG16:73393880..73418011
Genome browser
AA seq
586 aa
AA seq
DB search
MAALELEWIPETLYNTAISAVVDNYSRSRRDIRCIPENIQFDVYYKLYQQGRLCQLGGEF
CELEVFAKVLRASDKRHLLHHCFQALMDHGVKVASVLANSFSRRCSYIAESDAHVKVKAI
HFGFVLGGFLSDAGWYGDAENVFLACLQLCTLHDEVLHWYRAVECCVRLLHVRNGNCKYH
LGEETVKLAQLYMDKLAKHGHQANKAALYGELCALLFAKSLYDEAYRWCIEAMKEITVGL
PVKVVVDVLRQASKACVVKREFRKAEHLIKHAVFLAREHFGHKHPKYSDTLLDYGFYLLN
VDNICQSVAIYQTALDIRQSVFGGKNIHVATAHEDLAYSSYVHLYSSGKFDNALFHAERA
IDIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEERLLQDAHDLHLSSLQLAKKA
FGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASL
YNYDMNQYEDAERLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSVGNYEKVFEYHNIL
SNWNRLRDRQFAVADALEDVNTSPQATGEVVQSFLLSQNNGAGPPA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattggagctcgaatggatcccagagactctgtacaacactgctatatcagca
gtggtggacaattacagtcgatcgcgaagggatattcgttgcatccctgagaatattcaa
tttgatgtgtattacaagctgtaccagcagggtcggctctgccaactggggggagagttt
tgtgaactagaggtgtttgccaaagttctacgggcatctgataaaagacacctcctgcac
cactgcttccaggccctgatggatcatggggtgaaagtcgcctccgtcctggccaactcc
ttcagccgtcgctgctcctacattgcagagtctgatgcccatgtgaaagtgaaggccatt
cactttggctttgttttaggtggctttctgtctgatgcaggctggtatggtgatgcagag
aatgtgtttctggcgtgtctgcagctgtgcacactgcatgatgaggttctgcactggtac
cgtgctgtggagtgctgtgtcaggttgcttcatgtccggaatggcaactgcaagtaccat
cttggtgaagagactgtcaagttggcccagctgtacatggacaaactggccaaacatggt
catcaggccaacaaagctgcactctatggagagctgtgtgctctgctctttgctaagagc
ctttatgatgaggcctacaggtggtgcatagaggcaatgaaagagatcacagtgggtttg
cctgttaaggttgtggtagatgtcctaagacaggcttccaaggcctgtgtagtaaagagg
gagttcaggaaggcagagcatctgataaagcatgctgttttcctggcacgtgagcatttt
ggacacaagcatcccaagtattcagacactctccttgattatggtttttatttgttgaat
gtggataacatctgccaatcagttgcaatataccagacggctctagatatccggcagtcg
gttttcgggggaaagaatatccatgtggccacagcacacgaggacctggcatactcctcc
tatgtgcatctgtacagctctggcaaatttgacaatgcactattccatgcagagcgggcc
atagacattatcactcacattctcccggaggatcatctgctgctggcctcctccaaaaga
gtcaaagctctgatcctggaggagattgctattgactgccacaacaaggagacagaggag
aggctgctccaggatgcccatgacctccacctctcctctctccagctggccaagaaagcc
tttggggagttcaatgttcagacagcgaagcactatggcaacctgggccgcctctaccag
tccatgaggaagttcaaggaggcagaggagatgcacatcaaggccattcagatcaaggag
cagcttctgggtcaggaggactatgaggtggctctgtctgtgggccacctagcctctctc
tacaactacgacatgaaccagtatgaagatgcagagaggctttacctgcgctccattgct
atcggtaagaagctgtttggggagggctacagtggactggaatacgactacaggggccta
attaaactttacaactctgtggggaactatgagaaagtctttgagtaccacaatatttta
tccaattggaaccggctgagggaccggcagtttgctgtggctgatgccttagaggacgta
aacaccagcccccaggccaccggggaggtggtgcagtccttcctactgtcacagaacaat
ggggctggcccacctgcttag
DBGET
integrated database retrieval system
