Oncorhynchus gorbuscha (pink salmon): 124000440
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Entry
124000440 CDS
T07892
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124000440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124000440
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124000440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
124000440
NCBI-ProteinID:
XP_046162752
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All DBs
Position
LG02:complement(28979933..29025142)
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AA seq
820 aa
AA seq
DB search
MEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSDAGTPGRSALDS
VEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVVDSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVDLQMAFVTQALQFLENSYKNYTMVTVFGNLLQAQLGGVPGTYQLVCSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSAIQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELGLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNSQGENMFMCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVALEAENKGLFEEAVKLYELTKNPDRVLELMNKLLSPVIAQVGSTQSN
KERLKNTAVAIAERYRTQGVAGEKSVDSTFYLLLDLMTFFDEYHVGHIDQAYDVMERLKL
VPLSQDCVEERVAAFRNFSDEVRHNLSEVLLATMNILFMQYKRLKGATAGAPGRPQRSME
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagggctttggagagctcctgcagcaggcggagcagcttgcagcggaaaca
gaggctgtgtctgagcttccccatgttgagaggaaccttcaggagatccagcaggctgga
gagaggctacgttcccgcaccttaacccgaacgtcgcaagacgctgctgacgtaaaagcc
tctatcctcctaggttccagaggcctggacatcttccacatctcccagcgtctggagagc
ctgagtgctgccaccacctttgaacctctggagccagtgaaagacactgacatccagggc
tttctgaagaatgagagggacaatgcgctgctctctgcaatcgaggagtcacgtcgcagg
acgttcctcctggcagaggagtaccaccgtgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccttgctgggagcaggggaagatgctctggacttcagccaa
gatgtagagcccagctttgtgagtgacgcagggactcctgggcggagtgctcttgacagc
gtggaggtagcctatggacgacagatctacgtcttcaatgagaagatagtgaacggacac
gtccagcccaacctgggagacctctgtgcctcagtggtagacagcctggatgacaagaac
gtgtcagatatgtggctgatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacgtccgtggatctgcagatggcttttgtcacgcaggccctg
cagttcctggagaacagctacaagaactacaccatggtaacggtgtttgggaacctgctc
caggcccagctgggcggagtccctggcacctatcagctggtgtgcagcttcctcaacatc
aagctaccagggcctttgccaggcatgcaggatggtgaggtggagggtcacccagtctgg
gctctgatctactactgccttcgctgtggggacctgggggctgccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggaatatatgaacagccct
gacagacgcttggcccctgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaacagcgctgacccctacaagagggccgtctactgcctcattgggaaatgtgacatt
gcagacaaccatggagaggtggccgacaaaaccgaggactacctgtggctcaagctcaac
caggtgtgcttcgatgacgacggcagcagtgctcctcaggacagactgacactggcccag
ctacagaaacagcttctagaggactatggagagtcccacttctcagccatccagcagccg
ttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgctgtggccttcctg
ttccgggtggagcgtctacgcagtcatgcggttcacgtggctctggttctctacgaacta
gggctgctgctcaagtcatctggacagagcgcacaactgttgagtcaggaggctggggac
ccccctatggtccgacggctcaacttcatccgtctcctcatgctctacacacgcaagttt
gagtccacagacccccgggaagctctacagtacttctacttcctacggaatgaaaaaaac
agccaaggagaaaacatgtttatgtgctgtgttagcgagctggtgattgagagtcgagag
ttcgacatgcttctgggaagactggaaaaagatggcagcaggaagcctggagtgattgat
aaatttgccggagacacgcgagccattatcacaaaagtggcgctggaggcagagaacaag
ggcctgtttgaggaagcagtcaaactgtatgagctgaccaagaatccagacagggtccta
gagctgatgaacaagctgctgagtcctgttattgcccaagtgggctccacccagtccaat
aaggagagactgaagaacaccgctgttgccatcgctgagcggtaccggacccagggtgtt
gctggagagaagtctgtggacagcaccttctacctgctgctggacctcatgaccttcttt
gatgagtaccatgttggtcacatagaccaagcctacgatgttatggagagactgaagctg
gtccctctgagtcaggactgtgtggaggagagggtcgctgcattccgtaatttcagtgat
gaggtcaggcataatttgtcggaggttctcctggccaccatgaacatcctgttcatgcag
tacaaacgtctgaagggcgccacagcaggagcccctggtcgaccacagagatccatggag
gacagagactcgcaactgcgcagccaggctcgagcactgatcacgtttgctgggattatc
ccataccgcatggcaggcgacaccaatgcccggctggtgcagatggaggtcctaatgaac
tga
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