Oncorhynchus gorbuscha (pink salmon): 124000486
Help
Entry
124000486 CDS
T07892
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124000486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124000486
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
124000486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
124000486
NCBI-ProteinID:
XP_046162825
LinkDB
All DBs
Position
LG16:complement(42448293..42452759)
Genome browser
AA seq
312 aa
AA seq
DB search
MPVSRMRMRPWLEEKIESNTISGLVWVDKDNKIFSIPWKHAARHGWDLNKDACLFKQWAM
HTGKFIQGETKPDPKTWKANFRCAMNSLPDIEEVKDKSINRGSGAVRVYKMKNVHSKPNN
KRSKANTVKKNNKGSQIKTEGMVYSETICPEDLNTNTHPQEDSMTQESIVDSTDNLDDFT
FAPECSTSVEIGPDSTNNFYTSFQVSPDHPTDYEDSHQETLIEMTQHWEQGSVNDKGFLS
NEVETSESFDTAESYHSPESQWSDNSGAEIELRLYTELISGLPIIDDIHPYTDYWSLNNN
TSSYPQQITCPL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgagaccttggttggaggaaaagattgagtccaacacc
atcagtggattggtgtgggtggacaaggacaataagattttctccatcccatggaagcat
gctgcacgtcatggatgggacttgaacaaggacgcatgtctgttcaagcaatgggccatg
cacacagggaaattcatacaaggcgagactaaaccggaccctaagacatggaaggctaat
ttccgctgtgcaatgaactcccttcctgacatagaggaagtgaaagacaaaagcatcaac
agagggagtggagcggtgcgtgtctacaagatgaagaacgtccactccaagccaaataac
aagaggtcaaaagcaaacactgtaaagaaaaataacaaggggtcacagatcaagacagag
ggaatggtgtacagtgaaaccatttgccccgaggacctcaataccaacacacacccgcag
gaggacagtatgacacaggaaagcatagtagacagcacagacaacctagatgatttcaca
tttgctccagagtgttccaccagtgtggaaataggcccagacagcaccaacaacttctac
acatctttccaagtgtcaccagaccaccccacagactatgaagacagtcaccaagaaacc
cttattgagatgacacagcattgggagcaaggcagtgtaaacgacaaggggttcctgagc
aatgaagtagaaacttcagagtccttcgacactgcagagtcttaccacagtccagagagc
caatggagtgataactcaggggcggaaatagagctgcggctgtacacagaactcatctca
ggacttccgatcattgacgatatccacccttacaccgactactggtcactgaacaacaac
acatccagttatccccaacagatcacatgcccactctga
DBGET
integrated database retrieval system
