Oncorhynchus gorbuscha (pink salmon): 124000510
Help
Entry
124000510 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124000510
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124000510
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124000510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
DUF6244
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
124000510
NCBI-ProteinID:
XP_046162871
LinkDB
All DBs
Position
LG16:82344423..82354844
Genome browser
AA seq
391 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTSEHAMQCILTRVD
FDLYYGGEAFSVEQPQSFSCPYCGKMGYTETSLQEHVTSDHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHHGRGLGGPRARRTNMHFTSSSTGG
LSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQ
QAQAARQQLETARNATRRSNPGGNISATIPPPSANSVGVAESNPMASHSSQFLLTRLNEP
KMSEAERQALEGERADRSLFVQELLLSTLMREESSSSDEDERRDFASFGAMGCVDIMPLD
VALENLNLRESGTGGYNSSSRSSKEPPPPPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgatgcgtgtttaaaagggaacttcagagggcgc
cggtacaagtgtttaatttgctacgactacgacctgtgcgcatcgtgctacgagagcgga
gctaccacaacgagacacacgtcggagcacgccatgcagtgtatattaaccagggtagac
tttgacctgtattacggcggcgaggcgttctcagtagagcagccccagagcttttcctgt
ccttactgtggtaaaatgggctacacagagacatccctacaggagcatgtcacctcagac
catgcagagacttccacagaggtgatctgtccaatatgtgctgcgttgccgggcggggac
cccaatcacgtgactgacgactttgctgctcatctcacacttgaacacagagcacctaga
gacttagatgagtccagtggcgtccggcatgtgcgtcgaatgttccaccacggtcgtggg
ctgggcggtcctagggcacgcaggaccaacatgcactttactagcagctccactgggggg
ctctcttcctcacagagttcctcttactcccccagtaacagggaagccatggaccctata
gcagagctattgtctcagctgtcgggcgtgcggcgctcggcgggtggccagctcaactca
tcgggcccgtctgcgtctcagctgcagcagctacagatgcagctgcagctggagcgccag
caggcccaggcggcccgccagcagctggagacggccaggaacgccacacgacgctctaac
cccggcggcaacatcagtgccaccatcccacctcccagcgccaactcggtcggcgtggcc
gagagcaatcccatggcctcccacagctcccagttcctgctcacacgtttgaatgagccc
aagatgtcggaggcggagcggcaggcgctggagggtgagcgcgccgaccgcagcctgttt
gtccaggagctgctgttgagcacgctgatgcgtgaggagagctcctcttcggacgaggac
gagcggcgagactttgccagctttggggccatgggctgcgtggatatcatgcctttagac
gtggccctggagaacctcaacctcagggagagcggtactggcggttacaacagcagctct
aggagctctaaggaacctccaccacctcctctttga
DBGET
integrated database retrieval system
