Oncorhynchus gorbuscha (pink salmon): 124000619
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Entry
124000619 CDS
T07892
Name
(RefSeq) tsukushi-like
KO
K08130
tsukushi
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ogo00535
]
124000619
Proteoglycans [BR:
ogo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
124000619
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
LRR_NXF1-5
LRR_EndoS
LRR_14
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
124000619
NCBI-ProteinID:
XP_046163090
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All DBs
Position
LG16:65872261..65879675
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AA seq
355 aa
AA seq
DB search
MSSFLGVSVWFLLVLHYVAAVMDCHPGCRCEVESFGLFHSFSLTRVDCSGVGRGHGLVVP
ISIPLDTSSLDLSSSAIHTIADSMLSGPGYTTLASLDLSNNLLSRLNSSIFSRLRYLETL
DLSHNTLEELAPGCFSGLPLAEVDLSGNRLQEVNLEVFSNKGHGAGPLNVDLSNNLLNTV
TTRDPQVLSPPNIQSLSLAGNRLRAVPKLQGLPLRSLSLDGNPILSIERHSFTGLRDLAY
LSLSGLSELTSIQLQSFSELSSLQVLDLSHNSRLRPLNPEVFSGLAALQELNLSNSGVVS
LPSNILNLLPSIKSIVLREKVNCWKTHRQVQFHRQIGGQSTRGEELTCDVIGIVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttcctgggtgtgagtgtttggttcttgcttgtccttcactatgtggctgca
gtgatggactgccacccgggttgtcgctgtgaagtcgagagcttcggcctgttccacagc
ttcagcctgacccgggtcgactgtagtggggtgggccgtggtcatggcctggtggtcccc
atctccatccccctggacacctcctccctagacctgtcctccagcgccatccacaccatc
gctgactccatgctgtctgggccgggctacaccacgctggccagcctagacctcagcaac
aacctcctctccaggctcaacagcagcatcttctccaggctgcgctacctggagaccttg
gacctgagccacaacaccctggaggagctggcccccggctgcttctctggcttgcccctg
gccgaggtggacctgagcggcaacaggctccaggaggtcaacctggaggtcttttccaac
aagggccacggtgcaggacctctcaatgtggacctgtctaacaacctgctgaacactgtc
acgactagggatccacaggtgctaagccctcctaacattcagagcctcagtctggcaggg
aatcgtctgagggctgtgcccaagctgcagggcctccctctaaggtctctgagcctggac
ggcaaccccatcctcagcatcgaaaggcacagcttcacagggctaagggatctggcttac
ctgtctctcagtggactgtctgagctcacctccatccagctccaaagtttcagtgagctg
agcagcctgcaggtcctggacctgtcccacaacagcaggctgagaccacttaaccctgag
gtgtttagcggactggctgccttacaggagctcaacctgtccaactcaggggtggtgtct
ctgcccagcaacattctcaacctcctgcccagcatcaaaagcatcgttctcagggagaag
gtaaactgttggaagacccatagacaggtgcagttccacagacagataggaggacagtca
acaaggggggaggaattgacctgtgatgtcataggaattgttttatga
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