Oncorhynchus gorbuscha (pink salmon): 124000625
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Entry
124000625 CDS
T07892
Name
(RefSeq) uncharacterized protein LOC124000625 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124000625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124000625
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124000625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
124000625
NCBI-ProteinID:
XP_046163098
LinkDB
All DBs
Position
LG16:complement(37160189..37190724)
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AA seq
1539 aa
AA seq
DB search
MMSLIELNDDQRWVPTHVNVTVLRARGLRTKGKHGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEAGGRSAFPSGSGDLVLTVMHRVLIGLDVFLGQAIVPLDKIFQD
GMCPRDEWLKLNSKASRKEKERGEIQVTVQFTRNNMTASMFDLTMKDKPRSTFGKLKDRV
TGRKRGDMESSSAIVPGRFAALSSSLGQPFGEGSGGGEDPGEVEVAEEKRSKVKDFFLGK
GKLRRSSDTRSCSSLASESSMSSTTSESPSLGLGLLVDPPSSPIYSSKVKDTHHGDTDQA
KKVLTTTQSSPKILTHKRAFSDEASRITTTAIPRPCPAVASLKGQGMTLSQSSLCINGSH
VYGSEPVGPKGSSTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSAGEGRRWSFDKVKKDE
KDEEKEAEPPVSQFQSARVGGRPVQAAAPMLSSTTTVDSADKGKKLRKTLFSGGRSDSLP
AKSELSQGSPPPEGRLRGWFGSSDSQNKPRLEVSPKVESESDIPPPLPPRSLIPLQCSSP
SASFTGHSSPDSPHPTNPFTPSPSPSLTPDPISPFNPFLPRMQCNPFFEDLIAEEGQRSP
PLGTCSPVTPLCHSTALPCVPSPTHDPAVQIEMAAIWRDRPRPVARQTSLPALLPTPATA
SPPNPFTSRSISESGGGEWDESFDAFASSRLNSPKGSPNNHPLIVTSRQAQVRSTPPYES
YTIPPIEEMRMSEEEEPPPLPPRRPIIRTLVNGRPSDSWLHRGQELAVQKEACLLSQTGA
ASLQHTREWGHKRHTPSPHLYPSPGKDLVSSDLLDFHTVHSQHYANMSPSPFKSEDEFKK
FDYEPLRDEDDKIIFTEQDLWPDATDSIISLASEDRTDASPTVRKYAIVKNTSHSELKDL
SLPVMLLNSERTVADLLTKSSPKHSKSGLKTLDIASTPPDPTTDSFSIHPDKPNKSRNNN
YESPPLTLEDLNKNKSNSDFCFIDSASDASPSPSDMMTVHTLKSLGGICPQPPQDTPIAL
SHEQMMLYAEDMLIFQKTSTIDVNSAVKLNLPEVSSLCQDNCQDGGCELNTSRRDSASNM
KSISIFTPDSLNIERETVELKDTQSPMDRNGNITKSKIDSSKLDPLCHVRSFPVSSHVEM
QQEVVCNKQEVSQPLAKQTNPVNESSPRGTSSHRSLKGMIRELHGKSGANSPGKGLGESP
LHQSPSPGQIILESIEGPFSYQPTKSPFSSPLSPNRETTLKAALFLSSQKIHSNSSTQSI
PKENCLTEHSSSKYAGAISFEDLHAKVAPNVRSPMSARLRPGTTVHTSNPCASNPSSATP
FLATETNGQAKLPPTLVPPSIHHPPTVRPSTGASATLAVAPYTSSSFSSSSSYTTAQPLV
DARHTLLPEETQPASSLPRQESSPHPVKPLTTTASQGEKKEGRSVLEKLKSSIHPGRSAQ
QTLAVAETEKKIEESLADSSAQYEQLTNMELISLLLQQEMDMEKQQVASDQQAVMLEKHE
AELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagagttgaacgatgaccagagatgggtgcctacacatgtgaatgtc
actgtccttcgtgcaaggggtttgcggacgaagggcaagcacgggagccgttatgtttac
accatcattcaggttgggaaggagaaatacaccaccggtttggtcgaaaaggcgactgtg
ccagagtggaatgaggaatgttgtttcgaacttctccccggaatactggaggctgggggt
cgcagtgcatttccttcggggagcggcgacttggtcctcaccgtcatgcaccgggtgctt
atcggactcgacgtgtttcttggtcaagcaatcgtccccctggataaaatatttcaagat
ggaatgtgtcctagagatgaatggctcaaactcaactccaaggccagccggaaggagaag
gagcgtggcgagatacaggtaacggtccagttcacgcgcaacaacatgacagccagcatg
tttgaccttaccatgaaggacaagccacgctctaccttcggcaaactcaaggaccgcgtg
acggggaggaagaggggcgacatggagtcctcctcggctattgtgccgggacgcttcgcc
gccctgtcgagttccctggggcagccattcggggaggggagtggagggggagaggacccc
ggggaggtagaggtagccgaggagaagcggagcaaggtgaaggattttttcctgggtaag
ggaaagctgcggaggtcttctgacacgaggtcgtgttcgtcgctggcctcagaaagcagt
atgtcatccacgaccagtgagagcccttctcttggtctaggcctcctggtggaccccccc
agctcccccatctacagcagcaaggtcaaagacacccaccacggagatacagaccaagct
aaaaaagtgcttaccaccacacagtcttccccaaagatactgacccacaagcgagccttc
agcgacgaggcgagtaggatcaccacgactgccattccccggccctgtcctgctgtggcg
tccctaaagggtcaaggtatgactctctcccaatcctctctgtgcatcaacggaagccac
gtctatggatctgaaccggtgggtcccaagggctcaagcacccttccatccaagctggtc
ctgctcgagaagtgctcccctctctctcgttcgctgcagaacctcacaaagcggagcgag
gacaagggttccgctggcgagggtcggcgctggtccttcgacaaggtaaagaaagacgag
aaggatgaggagaaggaggccgaacctccagtctcccagtttcaaagtgctcgagtgggg
ggtcggccggtgcaggcagcagccccgatgctgtcttctactaccacggtggactcagca
gacaaagggaagaagctcagaaaaacgttattctccggagggaggagtgattctctacct
gccaagtccgagctgagccagggttctcctccccctgaggggagactgcgaggctggttt
ggctccagtgactcccagaacaagccaaggctggaagtttctcctaaggtagaaagcgaa
tcagacatccctcctcctctcccccctcgctccctcattcccctccagtgctcgtctccc
tctgcttctttcactggacattcctcgcccgacagtccccatccaactaaccccttcact
ccctctccctctccctctctgacccctgaccccatctctccattcaaccccttcctcccg
cgtatgcagtgtaaccccttttttgaggacctcattgcagaagagggccagaggtccccc
cctcttggtacctgctcccccgtcacacccctctgtcattccacagctttgccttgcgtc
cccagtcccacccacgatcccgccgtgcaaattgaaatggccgccatatggcgagaccgg
cccaggcctgtagccaggcaaacgtccctccctgccttacttccgacaccagcgacggct
agcccccccaatccgtttacgtctcgctccatatcagagagtgggggaggagaatgggat
gagtcctttgatgcctttgcctccagcagactgaattcgccaaagggctctcctaacaat
caccctttaatagtaacctcaaggcaagcccaagtaagaagcactcctccatatgagagt
tacactattccacccattgaggagatgaggatgagtgaagaagaagagcctccaccattg
cctccacggaggcccataatacggactctggtgaacgggagaccctctgacagctggttg
cacaggggtcaggaactggcggtgcagaaagaggcctgtctcctgtcacaaacaggtgca
gcttccctacagcacacaagagaatgggggcacaagagacacacaccaagtccccacctg
tacccaagcccaggcaaagaccttgtcagtagtgacctgttggactttcataccgtacac
tcacaacattatgccaacatgtctccatctccattcaagtctgaagatgagttcaagaag
tttgactatgaaccattacgagatgaagatgataaaattatatttactgagcaggaccta
tggccagatgcaacagattcaataatatcgttggcttcagaggataggacggacgccagt
cccactgtaagaaaatatgctattgtaaagaacacttcacattctgaactcaaagactta
tctctgccagtaatgcttcttaatagtgaaaggactgttgccgatctactgactaagtct
tccccaaaacactctaaatcaggtcttaagacactagacattgcttcaactccaccagac
ccaacaacggactcgttctcaattcacccagataagcccaacaaatccaggaacaacaat
tatgaatcacctccgctaaccttagaagaccttaataaaaacaaaagtaactcagatttt
tgttttattgactctgcttctgatgcttccccatctccatctgacatgatgacagtgcat
accctcaaaagtttaggtggcatttgtcctcaacctccacaagatactcccatagcatta
tctcatgagcagatgatgctatatgcagaagatatgttaatttttcagaagactagtact
atagacgtcaactctgctgtaaaactgaacttaccagaagtctcctcgctttgtcaagac
aattgtcaagatggaggatgtgaattgaatacatcacgcagagattctgcaagcaatatg
aagagcattagcatttttacgcctgacagtcttaacatagagagagagactgtagaatta
aaagacactcaatctccaatggatagaaatggcaacattacaaaatcaaagatagacagt
tcaaaactagaccctttatgtcatgttagatcttttccagtttcgtcccacgtggaaatg
caacaggaagttgtatgcaataaacaggaagtgagtcagcctctggccaaacaaaccaat
cctgtcaatgagtcttcaccaaggggcactagttctcacagaagtctcaagggaatgata
cgagagctccacggcaaaagtggtgcaaatagccctggcaaaggattaggtgagagccct
cttcaccaatcaccgtcacctgggcaaataatcttagagagcattgaaggaccgttctca
tatcaacccaccaaatctcctttttcctcacctttgtcaccgaatagagagacaacgctc
aaggcagcgttatttttgtcctcgcaaaaaatacactcaaatagttccactcagtcaatt
ccaaaagaaaactgcttaacggaacattcctcatccaaatatgctggggcgatcagcttt
gaagacctccacgccaaagtagccccaaacgtgagaagccccatgagtgccaggttaagg
cctggcaccacagtgcatacttccaacccctgtgcttccaacccctcctctgctaccccc
ttcctggcaactgaaactaatggccaggctaagctgccccccacccttgtccccccctcc
atacatcaccccccgaccgtgaggcccagtaccggagccagtgccaccttggctgtggcc
ccctacacctcttcctccttctcctcctcttcctcctacaccactgcccagcccttggtc
gatgcacggcacacacttttgcctgaggagacacagccagctagcagcctgccccgacag
gagagcagcccccacccagtgaagcccttgaccaccacagccagtcagggggagaagaaa
gagggccggtcagttctggagaagctcaagtcttccatccacccaggccgctctgcccag
cagacactggccgtggctgagactgagaagaagattgaggaatcgttagcagacagctct
gcccagtacgagcagctgacaaacatggagctgatttcccttctgctgcagcaggagatg
gatatggagaagcagcaggtggcctccgaccagcaggcggtgatgctggagaaacacgag
gcggagctgaagaagatcaaggcacaggtgcgcgacctagaggactacatcgacaaactg
ctggtgcagatcatggagcagacacccacactcctccaagtgcgctcccggcacaagtga
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integrated database retrieval system
