KEGG   Oncorhynchus gorbuscha (pink salmon): 124000660
Entry
124000660         CDS       T07892                                 
Name
(RefSeq) transcription factor SOX-30-like
  KO
K09271  transcription factor SOX15/30
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ogo03000]
    124000660
Transcription factors [BR:ogo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    124000660
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 124000660
NCBI-ProteinID: XP_046163164
LinkDB
Position
LG16:complement(38712466..38726906)
AA seq 637 aa
MFATMDRHPKRRAQMTFKKSEPSQNEDDSGPPASKKNASEREEPTSSTERHRGDGEQKRP
VGRPKGSGRSGNSVIGDVQVRPKVIFKADNKWGGDGELMPTSSTHLKGAIQGRTVTFEKE
SASSLASKQSKATFDYPTTSQVLVIKEEIITTAPGQAKVKVDQEPATTHHQGCPPVAPTI
DFSKPIHVVHENGMTFTVLDGKAITLSKVPYPPLVHVNVPPPPVKVKTRGMNLTMPPSEA
ENLEVPQSIDRNGYIKRPMNAFMVWARIHRPALSKANPTANNADISVQLGIEWSKLTEEE
KRPYYVEARKLKDKHRQEFPGWIYQPRPGKRKCYPSVMSFAPESSCCSAGTSGPAAESYP
MTMMTMANTNTSSCVPYTQATGSNDHGLQVAITAAPNASQTTSPVSIFFQTTACPHPHPT
TSGGKPAERKHEASHSASNPEEAPKPRKISRQQAYYNSANEMPSTSMASSSRGLQMPLPN
MAHPRMYPPSPMPHPVGLFPTPRFPFAPPYFMPGPNFYPPGSYPYLHSPYSYPVLQPQDF
SNPMATPMATPGYPYDDNYDQHESTFSLLNRDYPFRQSGESGQRCQGQAPTASELLGSVP
LLDVRALENVFTNSASVQEVQVPNEEDEEDVRVMRIL
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgtttgccacaatggacaggcatcccaagcgaagagcgcaaatgacattcaagaaaagt
gaaccaagtcaaaacgaagatgacagtgggcctccagctagtaagaaaaatgcaagtgaa
cgcgaggaacctacatcttcaacagagaggcatcgaggtgatggagaacaaaaaagacca
gtgggtaggcctaaaggcagtggacgttctggaaatagtgttattggagatgttcaggtt
aggcctaaagttatttttaaagctgataataaatggggtggtgatggagagctaatgccc
acaagttcaacacacctcaagggagccattcaaggtcgaacagttacatttgaaaaggag
agcgcatcatcattagccagtaaacagagtaaagccacatttgattatcccacgacatct
caagtgctggtcatcaaggaggagatcatcacaactgctccaggtcaggccaaggtcaaa
gttgaccaagaacctgcaacaacgcatcatcaaggatgtccacctgtggctcccactata
gacttctccaaaccgatccatgttgtccacgaaaatgggatgaccttcacagtattggat
ggtaaagccataacgctcagcaaagttccatacccaccacttgttcatgtgaatgttccg
ccacccccagtaaaggtgaagactagagggatgaatctcaccatgccaccatcagaagca
gaaaatcttgaagtaccacagagcatagacaggaatggctacatcaagaggcctatgaat
gcgttcatggtctgggcgagaatccacaggcctgccctgtccaaggccaacccaacagcc
aataatgcagacatcagtgtgcagctaggaatagagtggagcaagcttactgaggaagag
aagaggccctactatgttgaagcacgtaaactcaaagacaagcacagacaggagttccca
ggttggatctatcagcccagacctggaaaaagaaagtgctacccttctgtgatgtccttt
gctcctgaatcatcttgctgctctgcagggacaagtggacctgcggctgagtcttatccc
atgaccatgatgactatggccaatactaacaccagctcctgtgttccatacacacaggcc
acaggctctaatgaccatggtctccaggtggctataacggcagctccaaatgcctctcag
actaccagcccagtctccatattcttccagactactgcctgcccacatccccacccaaca
acctctggtggtaagcctgcagaacgcaagcatgaagccagtcactctgccagcaatcct
gaagaagctcccaaacccagaaaaatcagcaggcaacaggcctactacaattctgccaat
gagatgccctcaacaagcatggcatccagctccagaggtctccaaatgccactccctaac
atggctcaccctcgcatgtatcctccatctcccatgccacatccagtgggcctcttcccc
acccctcgcttcccctttgctccgccctacttcatgcctggacccaatttttatcctcca
ggatcatacccttacctacacagcccatactcctacccagttctccaaccccaggatttc
tcaaaccccatggctactcccatggctactccgggctacccctatgatgacaactacgat
cagcatgagtccacattttcccttctcaacagagactacccgtttcggcagagtggagaa
agcgggcagagatgtcaagggcaggcccccactgcctctgagctcctaggttcggtccca
cttctggacgtacgtgccctggagaacgtcttcaccaactctgccagtgtccaggaggtc
caagtccccaatgaggaagacgaggaagatgtgcgcgtgatgagaattctctag

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