Oncorhynchus gorbuscha (pink salmon): 124000663
Help
Entry
124000663 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124000663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124000663
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124000663
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124000663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
124000663
NCBI-ProteinID:
XP_046163167
LinkDB
All DBs
Position
LG16:complement(50575145..50725701)
Genome browser
AA seq
860 aa
AA seq
DB search
MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDNDAALELHESDSLPLPVVLVKAEDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHPHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLSHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPGSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPHISEGGAHSRGAEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRRDSMEAGAQRPRSLDSVMNRDRGQGSPEEQPQAMFSHVHYHRHRH
HHYGEDGEREHAHGQGPGRGSDEEQGAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCSKA
EHTDSREVHGHGIEDHEISLSPPSGPPPALVAPAPLAVPAPCCHQDHGRGGHPHRRADRL
GGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGALGGL
EDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRRHHGHHSPAHDRNTD
FCLYCKTLHNNQGSEEESGV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagacgggcctggagctggcggcggccgtagaaacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctgagacacgagcccacggggaagcccatc
actctggaagggctgtttgtcggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccccctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaaactggagagcccggagcgcaaggtgcctcaatgtctgcccctgctcaag
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aatgacgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctgaggatgctgaggagctgatgggactggttaacaagaacgaggaggctagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctt
actatagtcctggctattctggccatcgttttgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacccccacccctacccacacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgagccactacagcagctcccca
cccctggacccacagaccctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggacg
gcaggtcaccctctggggtcccactacggccccgggtcccaccgctcctgccacgcctac
cgctccggctgccctgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccacatctccgaagggggagcccatagccggggggctgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtatggtagctggtccacgttccgcagctccctgagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgcagggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacaaggg
agccctgaggagcagccgcaggctatgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggagcgggagcacgcccatggacaggggccaggcaggggg
tcagacgaggagcagggggctgctgttgctattggctctggtactggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgctctaaggca
gaacacacagacagtagggaggtccacggccacgggatagaggaccatgagattagcctc
agccccccgtcaggcccccctcctgccctggtagcaccagcacccttagcagtcccagcc
ccctgctgccaccaggaccacggccgtggaggccacccccaccggagggcagaccggctc
ggcggctgcgtcctcgacggcccctcggtgctcttccaccagagcctggaactgcaggat
gactgtagcatccacattcattacggccagggccccagctactgctgccccccgcctgac
ctgcccatgcctgtgcctttcattctggactctgggggtatgggggccctagggggccta
gaggactggccctgctgtggagggccccaccatgtagtgtggcagaagcgggtgcagcag
gcccactctgagccccagttgctggggccagggctggggggccctatggacagacccccg
cccccatgcagccggcgtcaccacggtcaccacagcccagcgcacgaccgcaacacagac
ttttgtttatactgcaaaacattacacaacaatcagggatcagaggaggagtccggtgtg
tga
DBGET
integrated database retrieval system
