Oncorhynchus gorbuscha (pink salmon): 124000816
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Entry
124000816 CDS
T07892
Name
(RefSeq) LIM/homeobox protein Lhx1-like
KO
K09372
LIM homeobox protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124000816
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
124000816
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124000816
NCBI-ProteinID:
XP_046163398
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Position
LG16:72874309..72879723
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AA seq
402 aa
AA seq
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MVHCAGCERPILDRFLLNVLDRPWHIKCVQCCDCKCNLTEKCFSREGRLYCKNDFFRRFG
TKCGGCAQGISPNDLVRRAKSKVFHLNCFTCMMCNKQLSTGEEMYILDEFKFVCKEDYLS
NSNGKDTTLLSVTTCSDPSLSPDSQDPQDDGKDSEIGPLSDKEVGSNENDEQNVGGKRRG
PRTTIKAKQLEVLKAAFTATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLS
ALGARRHSFFRSPRRMRTLVDRLEPGELVPNGHFSYYGDYQSEYYGPGGNFEYYTQGPPL
LQAQTPVDLGFSSGPAGTPLGGMDHHLAGHHPSGEVQCFTDIISHHPVDSPSPEPNGPGS
MHSISSEMCGVSTPFTSLSINGSGYSNQLSHPSSEMSEGTVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggttcactgtgccggctgcgaaagacctattctggacaggtttctactcaatgttctg
gacagaccatggcacatcaagtgcgtacagtgctgtgactgtaaatgcaatttgacagaa
aaatgtttttcacgggaagggaggctgtactgtaaaaacgacttttttaggagatttggc
acaaagtgtggaggttgcgcccagggaatctcgcccaacgatttggttcgaagagcaaag
agcaaagtgtttcacttgaactgtttcacgtgcatgatgtgtaacaaacagctatctact
ggagaggaaatgtacattttagatgaatttaagtttgtttgtaaagaggactacctaagc
aacagcaacggaaaggacacaaccctcctctcagtcacgacctgcagtgacccaagtcta
tctccagattcccaagacccacaggatgatggtaaagattcggaaatcgggcctttatcc
gataaagaggtgggtagcaatgaaaacgatgagcagaacgtaggggggaaacgacgtggg
cctcgaacaactataaaagccaagcaacttgaggtcctcaaagctgctttcacggccacg
ccaaaacccacccggcacatccgagaacagctggcgcaggagacagggctcaacatgaga
gtgatccaggtttggttccaaaatcggcggtctaaagagcggcgcatgaagcagctgagt
gcactgggggcgagaaggcactcgttcttccgcagtccaaggagaatgagaactctggtg
gaccgactcgaacccggggagctggtccccaacggccatttctcatactatggtgattat
cagagtgaatactatggacctggaggaaattttgagtactacacccaaggcccccccttg
ttgcaggcccagaccccagtggacctaggcttctcctctggccctgctggcaccccttta
ggtggcatggaccatcacctggctgggcaccacccatctggtgaggtgcagtgcttcact
gacatcatatctcaccatccagtggactcgcctagccccgagcccaacggacccggatca
atgcacagcatctccagtgagatgtgtggcgtcagcacacccttcacctcactgtccatc
aacggcagtggatacagcaaccaattgtcacatccctcctcagagatgagcgaaggcact
gtctggtag
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