Oncorhynchus gorbuscha (pink salmon): 124000837
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Entry
124000837 CDS
T07892
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124000837
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
124000837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124000837
NCBI-ProteinID:
XP_046163443
LinkDB
All DBs
Position
LG16:complement(59345234..59611244)
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AA seq
1541 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQRELDATATALANRQDESEQSRKKLIDQSREFKKNTPEDL
RKLVAPLLKGFQAEIDAVSKRSKESEAAFLSVYKRFIDVPDPVSALEATQQLQLKVQRMH
DIETENQKLRETLEGYTQEIAEVKNHEVTIKALKEKIEEYEETLKKQAKELGQEERREEE
KEKKEGEDGQLHNNHAEEACQQQENQESAVSKLEEADSKAQSLQTALEASQAELLDLKSK
YDEESTSKANEIEVVMSDLERANQRADVAEREAEALREQLTSANKSLQLATQIQKAPDME
QALEVLSRSSLEVELNAKEREVLHLAEDVQRLQASLANVRENSASQISRLEQQLSTKESS
LKQLEEKLQEQADYEGIKKELSFRKSVEFGSSNYSSAQDSKKPLELLLEKSRGLHSESSS
LRLNNSELSSLRERKVKESSEGQQRLCTTPMGTNLKGSPPPPSSQLLLRTGSGGSSDTTP
VTAANGTHHFSPTSGGLGGQDFFSPSSLASAGTAFPLGGKVVLNSLLQRQLMQTFYSKAL
QDSVSASGQALLFSPSNYPTHNSLSASPLPPHQSLQSQSQHPSAGSPDVNGLAPSPSQSE
GAGSVSEGEDMDTSEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT
IRGKEPFHKMRQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGN
ITTRIRTSESGSDEAIKSILEQAKRELQVQKADGVEDRQRRQTGYPRGMGNYFAKYAQSL
RLDSSQPPPSSSIGGGGIGSGGSSSSDETIRSILEQARREMEAQQAALEPILKASSMGPS
DLALLSPKLLGAPILPASYSPLALSLKKPSIPPTSSPSSILDFHSAMVKKEAGEVVGEGG
GGGGLLMDGGTKQGRGSWRDQWWSSMHPGVQGATASLNDDVRSQEDSKEKPPRLAGSSSV
LAPSSVSISSLDYWKDWPRAESPYSQASSEHGGGTKTQGPSRADTPQSSLSPLSLGPLGS
LLTPAAKQAKPVVAPLTPEQYEFYMYQEVDTAELTQQVKDKLAKNGICQRIFGEKVLGLS
QGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQENTPKTSASCSP
APESPLSSAEESVKSLGEQGGGGGGCGGGSSQVPPREPSEPSESQPGTPLPVPGHSGLSI
QEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSL
KGREPFVRMQLWLQDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQTADSGGLSGGDFSQG
CSPQHGLGHHLHQQQPPQQHLKKARVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNL
KTSTVINWFHNYRSRIRRELFIEEIQRGEGGSPSTRAGKASEGDSCDGTESDGTVEGTRP
GHEHHPASEGEGGSDHRDDGTTSATGSNTAGTSGHHKGGALDSLFSFPESTHVSSASVAT
TTAARNPRDSSLRKKKAANLNNIIHRLEKAAGKDEPHEWEF
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagagaactggatgccaccgccacagccctggccaacagacaggatgagagtgagcag
tcgaggaaaaagctcatcgaccaaagccgtgagttcaagaaaaacacaccagaggatctg
cgaaagctggtagctccgttgctcaaaggcttccaagcagagatcgacgcggtgagtaaa
agaagtaaggagtcagaggctgccttcctaagtgtgtacaagagattcatagatgtccca
gaccctgtgtcggccctggaggctacccagcagctacagctgaaggtccagaggatgcac
gacatcgagacggagaaccagaagctccgcgagacgctggagggctacacccaggagatc
gctgaggtcaagaaccacgaggtcacaattaaagcacttaaggagaagatagaagagtat
gaagagaccctgaagaagcaggccaaggagctgggccaggaggagaggagagaggaagag
aaggagaagaaagagggcgaggatgggcagctccacaacaaccatgcagaggaggcgtgt
caacaacaggagaaccaggagtctgcggtgtcaaagctggaggaggcagacagtaaggcc
cagtccctacagacagcacttgaagcaagtcaggcagagcttttggacctgaagagcaag
tatgacgaagagtcaacatcaaaggccaatgagattgaggtggtgatgtcagacctggag
agagccaatcagagagcggatgtagcggagagggaagcagaggctcttcgggaacagctg
acatccgccaacaagtctctccagcttgccacacagatccagaaggcccctgacatggag
caagccttggaggttctgtcacgttccagtctggaggtggagctgaacgcaaaggagcgg
gaggtactgcacttggctgaggacgtgcagagactgcaggccagcctggccaacgtccgt
gagaactcggcctcgcaaatcagccggctggagcagcagctcagcaccaaggagagctca
ctcaagcaactggaggagaaactgcaggagcaggcagactacgaaggcatcaagaaagag
ctcagtttccgcaagtcagtagagttcggctcttcaaactactcttcagcacaggactct
aagaagcctctggagttgttgttggagaagagtcgaggcctgcattctgagagctcctcc
ctgcgcctgaacaacagtgagctgagtagtttgagagagcgaaaggtcaaagagtcatcc
gagggacaacagcgtctctgcaccacacccatgggcaccaacttgaagggctcccctccc
cctccctcctctcagctcctcctgcgcactggctcaggtggttcctccgacaccacccct
gtcactgccgccaatggcacacaccacttctcgcccacgagtggcgggctgggtgggcag
gacttcttcagcccctcctctctggcgtcggcgggcaccgctttccccctggggggcaag
gtggtgctcaactccctgctgcagcgccagctcatgcagaccttttactccaaagccctg
caggactccgtgtctgcctccggccaggccctgctcttctccccttccaactaccccacc
cataactccctttcagccagccccctaccaccccatcagtctttgcagtcgcaatcccag
cacccgtcagcaggcagcccggatgtcaacggcctcgccccctcgcccagccagtcagaa
ggggcggggagcgtctcggaaggcgaagacatggacacgtctgagatagcgcggcaggtc
aaggagcagctgatcaagcacaacattgggcagaggatcttcggccactacgtgctgggg
ttgtcccagggctcggtcagtgagatactggccaggcccaaaccctggaacaagctcacc
atccggggcaaggagcccttccacaagatgaggcagttcctgtccgacgagcagaacatt
ctggcactgcgcagcatccaggggaggcagagagagaacccaggccagaacctgaacaga
gtgtttcaggaggttccgaagcgaagaaccggctccgaaggctcctcgaggccaggtaac
atcaccacgcggatccgcacctcggagagtggctcagatgaggccatcaagtccatcctg
gaacaggccaagagagagctgcaggttcagaaggctgatggtgtggaggacagacagcga
cgacagacaggttacccccgaggcatgggcaactattttgcaaaatatgcacaaagtctc
agacttgactcgtcccagccccctccctcgtccagcattggtggtggtggtatcggctca
ggtggatcctccagctcagacgagaccatccgctccatcctagagcaggcaaggagagag
atggaggcccagcaggccgccctggagcccatcctcaaggcatcctccatgggcccctcc
gacctggccctgctctcccccaaactcctgggcgcgccaatcctcccggcatcctactcg
cccctggccctctccctcaagaagccctccatccccccaacctcctctccctcctccatc
ctggatttccactctgccatggtgaagaaggaggcaggagaagtggtgggagaaggcggg
ggaggaggagggttgctaatggatggtgggaccaagcaggggcgaggctcctggagggat
caatggtggagcagtatgcaccccggggtgcagggagccacggcaagcctgaatgacgat
gtgcgtagtcaggaggacagcaaggagaagcctccccggctggccggctcatcctcggtg
ctggcaccctcctccgtctccatctcctccttggactactggaaggactggccccgggcc
gagtccccgtactcccaggccagctctgagcatggcgggggcaccaaaacccaggggccc
agccgcgccgacacaccccagagcagtctctctcccctaagcttgggtcctctggggtcc
ctgttgacccccgcagccaaacaagccaagcctgtggtggcgccgctcactcctgagcag
tacgagttctacatgtaccaagaggtggacacagccgagctcacgcagcaggtcaaagac
aagctggccaagaacggcatctgccagcgcatctttggagagaaggtgctgggcctgtct
cagggcagtgtgagcgacatgctgtccaggcccaagccctggagcaagctgacccagaag
ggccgggagcccttcatccgcatgcagctctggctcaacggagagctgggccagaatgtc
ctgcctttacagggccagccacaagaaaacaccccaaagacctcagccagctgcagcccg
gccccggagtcccccctcagctcagctgaggagtccgtgaagagccttggggagcagggg
ggaggaggagggggatgtggaggaggatcatcccaggtcccccccagggagcccagcgag
ccctctgagtcccagcccggcacgccactgcccgtccccggccactcaggtctcagcatc
caggagatggtggccatgtccccagagctggacacctatgtcatcaccaagaaggtcaag
gaggtgctgaccgacaacaaccttggtcagcgtctgtttggggaaacgatcctgggtctg
actcagggctcggtgtctgacctgctggcgagacccaaaccctggcacaagctcagcctg
aaaggacgcgagcccttcgtccgcatgcagctctggctccaggacccacgcaacgtggag
aaactcatggacatgaaacgcatggagaagaaagcgtacatgaagcggcgccacagctct
gtgagcgagagccagacggcggacagtggtggcctgtcagggggagacttcagccaggga
tgcagcccccagcacggcctcggccaccacctgcaccagcagcagcctccccagcagcac
ctgaagaaggcccgtgtggtgctggcccccgaggagaaggaggccctgaagagggcctac
cagcagaagccctacccctcgcccaagaccattgaggagctggcctcacagctcaatctc
aaaaccagcaccgtcatcaactggttccacaactataggtctcgtatccgacgggagctt
ttcatcgaggagatccagcgaggtgagggcggctctccgtccaccagggcgggcaaggcc
agtgagggcgacagctgtgacggtaccgagtcagatggcacagtggagggcacacgcccc
ggccacgagcaccacccggcctcagaaggtgagggggggtccgaccacagagacgacggc
accacgtcagccactggcagcaacactgcaggtaccagcggccaccacaagggcggcgcc
ctggacagcctgttcagcttccccgagagcacccatgtttcctctgcgtctgttgccacc
accactgctgcccgcaacccccgcgacagcagcctgcgcaagaagaaagccgccaacctc
aataatatcatccaccgcctggagaaggctgccggtaaagacgagccccacgagtgggag
ttctga
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integrated database retrieval system
