Oncorhynchus gorbuscha (pink salmon): 124000893
Help
Entry
124000893 CDS
T07892
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124000893 (chd2)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124000893 (chd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
124000893
NCBI-ProteinID:
XP_046163529
LinkDB
All DBs
Position
LG02:complement(31889840..31920884)
Genome browser
AA seq
1823 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNHSGLESGSQSESEQGRERRRLHHSGESNSSS
ESGSQSGSESESQQASVKDRQPVKKKDNLSDVKKMWEEHPDVYGVRRSNRSRQEPARLNI
GAGGSSDSEGESPKRKAPRQKKKENTWKSDESDDDDDDDDEEDASSADSEQEEKKVRSRR
LPARRPKNKSSTVKKQQPPKGRKTRKQESSVEEDDDDDDDDDDDDDDDDDTPKRQTRRRV
SAKVSYKEDQNDFETDSDDLIEMEGAEVEPEDDSETIEKIMDTRTGKKGACGASTTQYAV
EENGDPGADFDPEKDEGEIHYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNFKKKND
ELSAWLSKASPEDSEYYNCQQELTTDLNKQFHILERVIATKTGKTQGLSDFPSHSHKNGA
SSNEPEYLCKWMGLPYSECSWEDGALLGKKFQHCIDSFTNRNSSKTVPSKDCKVSEVLKQ
RPRFVALKNQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFL
SYMFHQHQLYGPSLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEWVCHQ
TKRIKFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSNHRLL
ITGTPLQNSLKELWSLLHFLMPDKFENWEDFESEHGKGTDNGYQSLHKVLEPFLLRRVKK
DVEKSLPAKVEQILRVDMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELKKCTN
HGFLIKQPEEECDTPQEHLKALVRGSGKLVLLDKLLTRLRDRGNRVLIFSQMVRMLDILA
EYLALKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI
FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMD
TTGRTVLDNNSGNSNSNPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILRLAET
RESDQGSSATDELLSQFKVANFSNMEESAPEMVERMVPDWDDIIPEDQRRRLEEEQKQKE
MEDIYMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSGDDKKPKRRGRPRARK
NNVEGFTDAEIRRFIKAYKKFGAPLERLEGIARDSELVDKSQADLKRLGELIHSSCVTAV
QEHEEHLRENPSEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPANPTERNQ
FQLTCRVKVPHFDVDWDLQDDTQLLLGVYEHGYGNWDLMKTDPDLKLADKILPDDPEKKP
QGKQLQARSDYLLKMLKKEADCKDVTKEEAKVKKRKPRLKKENKAPKDEQGNDISSPRMS
DNPSEEGEVRDDGTEKTPTKKRQKKKDNKENKEKHGTPKKEKDADKDKKRPKPKKEKAKG
AKGKKPQGPVHITAGSDPVPIGEEDDELDQENFSICKERMRPVKKALKQLDKPDEGLSVQ
EQLQHTRTCLLKIGDRITECLKAYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQ
KKRSREEEKEHRKKGDDPSGRKKTFRAEASGSSRDSTGTQPSSKSHPGMPHPSPTSPHGP
HREGYNQSNKRHFGNDDRGDWQRDRKYNYPGNSNQPWQSERHHPYDAHRYKDHHYGDRRP
REDSYRSSSSSYRSGGSSSSPRKRPYDQYDSDREHRDRRAYYDRHPDSKRRRGDDFRPPQ
DFRGSGGHPQDFRVRMPEHRGPPGPAGPEHFTRPYPDNKPPPLLDPRSPQAQKSPQDSRS
PTAERTAEQKAASADLNWNNRKT
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaagaagatgaaggttcgactcaaagcaatgcatca
agcaattcggcctcagaagaatcgaaccactctgggttggagtctgggagtcagtcggag
agtgaacagggcagggagaggagaagattgcaccactcaggagagtccaacagctcttct
gaatctgggagccagtccgggtctgagagtgaatcccagcaggcctcggtcaaggacaga
caaccagttaaaaagaaagacaatctgtcagatgtgaagaagatgtgggaagagcatcca
gatgtctatggggtcaggcgatcaaatcgcagtagacaagaacctgctcgtctcaatatt
ggagctgggggtagcagtgactccgaaggtgaaagtcctaaaagaaaagcaccacgacag
aagaagaaagaaaatacctggaaaagtgatgaatcggatgatgatgatgatgatgatgat
gaggaggatgccagcagtgcagacagtgagcaggaagagaaaaaagttagatccagacga
cttcctgctagaagaccaaagaacaaatcatctacagtcaaaaaacagcagcctccaaag
ggaaggaaaaccaggaaacaagagtcatctgtggaggaagatgatgacgacgacgacgat
gacgatgatgacgatgatgatgatgatgataccccaaagagacaaacccggcgaagggtg
tctgctaaagtcagttacaaggaggaccaaaatgactttgagactgactctgacgacctg
atagagatggagggagctgaggtggagccggaagatgacagcgagaccattgagaagatc
atggataccaggacaggcaaaaaaggagcctgcggggcttccactacgcagtatgctgtg
gaggaaaatggggacccaggagctgactttgacccagagaaggatgagggagagatccat
tacctgatcaagtggaaaggctggtcctacatccacaacacctgggagagcattgactcc
ctcactcaacagaaggtcaagggactcaagaaactagataacttcaagaagaagaacgat
gagctcagtgcttggttgagcaaagcatcacctgaggattcagaatattacaactgccag
caagagctaaccactgatttaaataagcagttccatattctggagagagtcattgcgact
aaaactgggaagacacagggtctctcggattttccttctcacagccacaagaatggtgct
tcttccaatgagccagagtacctgtgtaagtggatgggcctgccttattcagagtgcagc
tgggaggatggagctctgctggggaagaagttccagcactgtatagacagcttcaccaac
cggaactccagtaaaacagtcccctccaaagactgcaaagtgagtgaggtgttgaaacag
aggcccagatttgttgcactaaagaaccagccatcgtacattggggatgagaacctgcag
ctgagagattaccagttagatggactgaactggctggctcactcctggtgcaggtgcaat
agtgtgatcctggctgatgagatgggtctggggaaaaccatccagaccatctcgttcttg
tcctacatgttccaccagcaccagctgtatgggccctccctggtggtggtacccctatcc
accctcacctcctggcagagagagtttgacacctgggcccccgatatgaacgtggtggtc
tacttgggagacgtgatgagcaggaaatcgatccgtgactatgagtgggtatgccatcag
acgaagagaataaagttcaatgcacttataaccacgtatgaaattctactgaaagacaag
ggggtgttggggaacataaactgggctttcttgggtgtggacgaagctcacaggctaaag
aatgacgactcccttttgtacaaaaccctgattgagttccggtccaaccacagacttctt
atcacagggacaccactgcagaactctctcaaagagctgtggtcccttctgcacttcctc
atgcctgacaagtttgaaaattgggaagattttgaaagtgagcatggtaaagggactgac
aatggctaccagagccttcacaaagtccttgagccctttctcctgaggcgtgtaaagaag
gatgtggagaaatccctgcctgccaaggtagaacagatcctccgtgtggacatgtctgct
gtgcagaagcagtactacaagtggattctgaccaggaacttcagagccctgcagaaaggc
acccgaggcagctcctctggcttcctcaacatcgtcatggagctgaagaagtgcactaac
catggtttcctcatcaaacagcctgaggaagagtgtgacactccacaggagcacctaaag
gcgttggtgaggggcagtgggaagctggttcttctggacaagctactgaccagacttcgg
gacaggggcaacagagtcctcatcttctcccagatggtgcgcatgttggacatactggct
gagtacctggccctgaagcgctacccattccagcgcctggatggctccataaagggagaa
atacgaaaacaagcacttgaccactttaatgctgaaggttctgaggacttctgtttcctg
ctgtccacaagagctggaggtttgggtatcaaccttgcctctgcagatactgtggtcatc
tttgactctgactggaaccctcagaacgatctgcaggctcaggccagggctcacaggatt
ggccagaagaagcaggtgaatatctatcgcttggtcacaaagggatctgtggaggaggac
attattgagagagccaagaagaagatggttttggaccatcttgtcattcagagaatggac
accactggtcgaactgtattggataacaactccggaaattcaaactccaacccattcaat
aaagatgagctgactgccattctgaagtttggagctgaagatctgttcaaagaggcagaa
ggagaggagactgaacccacggagatggatattgatgagatcttgcggttggctgaaacc
agagaaagtgaccagggatcaagtgccacagatgagcttctctctcagttcaaggtggcc
aacttctccaacatggaggagagtgctccagagatggtggagcggatggtgcctgactgg
gacgacatcatcccggaggaccagcggcggaggctggaggaggagcagaagcagaaggag
atggaggacatctacatgctgcctagaagcaggagctccaataagagggcccaagccaac
gacagtgacagtgacgttggctccaagctgaagcaccgctcctcgggctccgagagcgag
acagacgatagcggcgatgacaagaagccaaagaggagaggcaggcccagagcccgcaag
aacaacgtggagggttttactgatgcagagatccggaggttcatcaaggcttataagaaa
tttggagctccgcttgaaaggctggagggcattgcccgggactcagagctggtggacaaa
tcccaggcagacctgaagagactgggcgagctgatccatagcagctgtgtgactgctgtc
caagagcatgaagagcacctcagagagaatcccagtgaagccaaaggccctgggaagcgc
agaggtattaacatcaagatctcaggagtgcaggtcaatgccaagtccatcattcagcac
gaggaggagtttgagccactgcacaaagctgtgccagctaatcctactgagagaaaccaa
ttccaactgacctgcagagtgaaggtgcctcactttgacgtggactgggatctgcaagat
gacactcaactgttgctgggggtctatgagcatggctatggaaactgggatctgatgaag
accgaccccgatctcaaactcgcagacaagattctcccagatgacccagagaagaaacct
caagggaagcagttgcaggccagatcagactatcttctgaagatgctgaagaaagaagcg
gactgtaaagatgttactaaggaggaggccaaagtgaagaagaggaagcctcggttgaag
aaagagaacaaggcccctaaagatgaacagggcaatgacatctcctccccccgcatgtca
gacaacccctcagaggaaggggaggtgagggatgacgggactgaaaaaactcccacaaag
aagaggcagaagaaaaaggataacaaagagaacaaagaaaaacacggaactcctaaaaaa
gagaaggacgcggacaaagacaaaaaacgtccgaagccaaaaaaagaaaaggcaaaagga
gctaaagggaagaagccccaggggccggtccacattactgctgggagtgaccctgttccc
atcggagaggaggacgatgagctggaccaagagaacttcagcatatgtaaggagcgcatg
aggccagtgaagaaggccttaaaacagttggataagcctgacgagggcctgtctgttcag
gagcagctccaacacacacgcacctgcctgctgaagataggagaccgcatcactgagtgt
cttaaagcctacagcgacccagagcatgtcaaaacatggcgtcggaacctctggattttt
gtgtctaagttcacagaatttggagcgaggaagcttcacaagctgtacaagatggctcag
aagaagcggtctcgggaggaggagaaggagcatagaaaaaagggggatgacccgtcaggc
aggaaaaagactttccgagcagaggcgtctggttccagtcgagactccaccggcacccag
ccatcgtccaagtctcatccaggcatgccccacccctctccaacatccccccatggtccc
cacagagaaggctacaaccagtccaacaagcgacactttggaaatgatgatcgaggagat
tggcagcgagatcgtaaatacaactaccctggaaatagcaaccagccctggcaaagcgag
cggcatcatccatatgacgcccatcggtataaggaccatcactatggtgaccgtcgtccg
cgtgaagactcctaccgcagcagctctagtagttaccgtagtggcggcagcagcagctcc
cctcggaagaggccgtatgaccagtatgacagcgaccgagaacacagggaccgtcgtgcc
tattacgacagacatccagactcaaagcggagacgtggcgatgacttccgtcctccccaa
gacttcagggggagtggaggccatccccaagacttcagggtgaggatgccagagcatagg
gggcccccggggccagcagggccagaacacttcacccggccctatccagacaacaaaccc
cccccactgctggacccacgctccccacaggcgcagaagtccccccaggactctcgctcg
ccaactgcagagcggactgcagagcagaaagcagcttcggctgatttaaactggaacaac
aggaagacatga
DBGET
integrated database retrieval system
