Oncorhynchus gorbuscha (pink salmon): 124001152
Help
Entry
124001152 CDS
T07892
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124001152 (rtf1)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124001152 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
124001152
NCBI-ProteinID:
XP_046163705
LinkDB
All DBs
Position
LG17:complement(2781746..2807612)
Genome browser
AA seq
703 aa
AA seq
DB search
MVNVKKRKGRVVIDSDSEDSASDDNLDQELLSLATKRKRVDSDDQQDNQQDDQPVSKPAA
SSDSETSDSDDEWTAGGPKVKKKVKPGKPTTTEKKKEAAKKKAHKAASSGSSGGDSSADS
SAPEEGEVSDSESNSSASSSDSSSEDDVFRDDYGEDLMGDEEDRARLEQMTEKEREQELF
NRIEKREVLKRRFEIKKKLKTAKKKEKEEKKKKEKEEKKKDEEERKKRERSSGHHEDRTH
QDLQVVMSHNKERRTKRDEKLDKKSQAMEELKAEREKKKTRTAELLAKRQPLKTSEVYSD
DEEEEEEEDEDKSSVKSDRSSRSSSYSEDEEKEETPPKSQPVSLPDELNRVRLSRHKLER
WCHMPFFQKTVSGCFVRIGIGNSSSKPVYRVAEIVDVVETAKVYQLGTTRTNKGLQLQHG
GDTRVFRLEFVSNQEFTENEFMKWKEAMIIASMQVPTLDEINKKEQAIKEACNYKFNDKD
IEDIVKEKDRFRKAPSNYAMKKTSLLKDKAMAEESGEGDRAKEIQDQLNELEERAEHLDR
QRTKNISAISYINQRNRSWNIVESEKALVAEGQNAKMQMDPFTRRQCKPTMVSNARDPSV
HAAILQHLNEKYGEGSGKEMDLEFEMGRGAGQAALKVIDPTKNTSDLSEDLFKVHDFDVK
IDLQVPNAEAKSLSVSANTLAVKDGAPRRSLNLEDYKKRRGLI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgtaaagaaacggaaaggtcgagtcgttatcgactcggactccgaagacagc
gccagtgatgataatttagatcaagagcttctgtctctggccaccaagaggaagagggtg
gactcagatgaccagcaggataaccaacaggatgaccagccagtcagtaagcctgcagcc
tcgtcagactcggagacatcagacagcgacgatgagtggaccgccggtggtcctaaagtc
aagaagaaagttaagccagggaaaccgacaacaacagagaagaagaaagaggcggcgaag
aagaaggcacataaagctgcgtcgtccgggagttctggtggagacagttcagctgacagt
tctgcccccgaggagggtgaggtgtctgactctgagagcaacagctctgcctccagctca
gactcctcgtcggaggacgatgtcttcagggacgactacggagaggacctgatgggagac
gaggaggacagggctcggctggagcagatgacggagaaggagagggagcaggagctcttc
aataggatagagaagagggaggtgctcaagaggagatttgaaattaaaaagaaactgaag
actgcgaagaagaaggagaaagaagagaagaagaagaaggagaaagaagagaagaagaag
gatgaggaagaacggaagaaacgagagagatcatccggtcatcatgaagaccggactcat
caggacctgcaggtggttatgtcccacaacaaggagaggagaactaaacgggatgagaag
ctggataaaaagtctcaggccatggaggaactgaaagcggagagagagaagaagaaaacg
aggacagcggagctcctggcgaaacggcagcccctgaagaccagcgaggtgtactctgac
gacgaggaggaggaagaggaggaggatgaagacaaatcctcagtaaagagcgatcgcagt
tcacgctcttcatcttattccgaagacgaagagaaagaggagacgccaccaaagtctcag
cccgtatcgctgccagacgagctgaaccgcgtccgtctgtcccgccacaaactggagcgc
tggtgccacatgccgttcttccagaagacggtcagcggctgcttcgtacggattggcatc
gggaacagtagtagcaaaccagtttacagggtggctgagatagttgacgttgtagagact
gctaaagtgtaccagttgggaacgacccggaccaacaaaggactacagttacagcatggt
ggtgatacccgagtcttcagactggagtttgtatccaatcaggagttcacagaaaacgag
ttcatgaagtggaaggaggcgatgatcatagccagtatgcaggttcccactctagatgag
atcaataagaaggaacaggccatcaaagaggcttgtaactacaaattcaacgacaaagac
atcgaggacattgttaaagagaaagacagattcagaaaggctccttccaactacgccatg
aagaaaacatcactactcaaagataaggccatggctgaggagagtggagaaggagaccga
gccaaagagatccaggaccagctgaatgagttggaggagagggccgagcatctggacaga
cagaggaccaaaaacatctctgccatcagctacatcaaccagaggaatcgtagctggaac
atcgtggagtctgagaaggctctagtcgctgaaggacagaatgccaagatgcagatggac
ccgtttactagacgacagtgcaaaccgaccatggtgtctaacgccagagacccttcagtc
catgcagctatcctccaacacctcaatgagaagtacggagaagggtcaggcaaagagatg
gacttggagtttgagatgggcaggggagcaggacaggctgctctcaaagtcatcgacccg
acaaagaacaccagcgacctatcagaggacctctttaaagtccacgactttgacgtcaag
attgacctacaggttcccaacgcagaagccaagtctctgtcagtgagcgccaacaccctg
gcagtgaaggacggtgctccacgtaggtctctcaacctggaggactacaagaagaggagg
ggcttgatctaa
DBGET
integrated database retrieval system
