KEGG   Oncorhynchus gorbuscha (pink salmon): 124001172
Entry
124001172         CDS       T07892                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082  ATP-dependent chromatin remodeling
ogo03083  Polycomb repressive complex
ogo04110  Cell cycle
ogo04330  Notch signaling pathway
ogo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124001172
   03083 Polycomb repressive complex
    124001172
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124001172
   04350 TGF-beta signaling pathway
    124001172
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124001172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    124001172
Enzymes [BR:ogo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     124001172
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     124001172
   HDAC complexes
    Sin3A-HDAC complex
     124001172
    BRAF-HDAC complex
     124001172
    REST complex
     124001172
    SHIP complex
     124001172
    MiDAC complex
     124001172
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     124001172
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124001172
  Chromatin remodeling factors
   NuRD complex
    124001172
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 124001172
NCBI-ProteinID: XP_046163731
LinkDB
Position
LG17:complement(20270878..20280605)
AA seq 498 aa
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACDEE
FSDSEDEAEGQGGGRRNAASFKKAKRTKTEEDKEKEGEEKKAGDDKKADDKKEVKEEKVP
EEEKMDTTKGPKEESKTP
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcgctgagttctcaaggaacaaagaaaaaagtgtgctactattacgatggtgatgtt
gggaattactactatggccaggggcatcccatgaagccacaccgtatccgcatgacacac
aacctcttgctgaactatggtctctacagaaagatggagatataccgacctcacaaagcc
agtggagaggagatgaccaagtaccacagtgacgactacatcaagttcctgcgttccatc
cggcctgacaacatgtcggagtacagcaaacagatgcagagatttaacgttggtgaggat
tgccctgtgtttgatggcctgtttgagttctgccagctctcaacaggaggctctgttgct
ggagctgtgaagctgaacaaacagcagacagacattgctattaactgggctggaggtctc
catcacgccaagaagtctgaggcgtcaggtttctgctatgtgaatgacattgtgctcgca
attttagagttactgaaataccaccagagagttctgtacatagacattgacattcaccat
ggagatggagtggaggaagcgttctacaccacagaccgggtcatgaccgtgtccttccac
aagtacggagagtacttccccggcactggagacctgagggatattggcgcagggaaaggc
aagtactatgctgtgaattaccctctgagagatgggatagatgacgagtcttacgaagcc
atattcaagcctatcatgactaaagtgatggagatgtaccagcctagtgcagtggttctt
cagtgtggagctgactctctctcgggagacaggcttggctgctttaacctcaccatcaaa
ggccatgctaagtgtgtggagtacatgaagagcttcaacctgcccctgctgatgctgggt
ggtggaggctataccatccggaacgtggcccgctgctggacctatgagacagccgtggcc
ctagacagctccataccaaacgagcttccatacaatgattattttgagtactttgggcca
gacttcaaactgcacatcagtccctccaacatgaccaaccagaacaccaacgactacctg
gagaagatcaagcagcgtctgtttgagaaccttcgtatgctgccccacgccccgggggtc
cagatgcaggccattccagaagacgccgtgcaggaggacagtggagacgaggaggaggaa
gaccctaacaaacggatatccattcgcgcccatgacaagaggatagcgtgtgacgaggag
ttctcagactctgaggacgaggctgagggtcaagggggcggacggagaaatgctgccagt
ttcaagaaagccaagagaacaaagactgaagaagacaaagaaaaagagggagaagagaag
aaagcaggcgatgacaagaaagctgatgacaagaaagaagttaaagaagaaaaggtgcca
gaggaggagaaaatggacacaacaaaggggccaaaagaggagtccaagacaccgtga

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