Oncorhynchus gorbuscha (pink salmon): 124001514 Help Entry 124001514         CDS       T07892                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo03018   RNA degradation Brite KEGG Orthology (KO) [BR:ogo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     124001514  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ogo03019]     124001514 Messenger RNA biogenesis [BR:ogo03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      124001514   mRNA degradation factors    5'-3' decay     Decapping complex      124001514 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 HTH_AraC Motif Other DBs NCBI-GeneID:  124001514 NCBI-ProteinID:  XP_046164302 LinkDB All DBs Position LG17:complement(48461720..48490215) Genome browser AA seq 808 aa AA seqDB search MFRFQSLDEDCTLEKEEGLVEEEDEIDQFNDDTFGDGAIDDDWQEEHKRLAELEEQKNDG LGGLGLGTLGMGGMGGGNASTVHLPPPASRVPHPSSLPPPHHSLSSMPSPGLEERVGGDL AESLAMLILGADPAIASVGGPAGPDDRSTGLPPPPSIPQQHHHPSQLPPHHQLTPSGLPP GPPHLSLLSYQQHQHLLRRGAAPMQQMNSHNIWENNLRFGPVSITPGLITQMEDSPLMSI IKEVGLPNRPPPMMSEDGRDLSERAPPPRSSSPVIGSPPVRAVPIGTPPKQPMSHAMNHH HHQQIHHPTAIHVRAPVHHQHRYPPSFPERISPNTLLNIANSPLCRPPFPAGVGPVLSQI QRAQMLNSQVAGFPRGCQGPPLLPGGGGFRPFFGQPPPHRPPPNHNHVPCPIIRHNTTHL HPQHRRMLTQRMQSRGGERGGRVGDWRSRDPYSNLMSQREKEWVAKIQMMQLQSTDPYLD DYYYQNYFEKLEKRQERDRDGMRKEHTTKLITPQVAKLEHTYRPVQFAGSLGKLTVSSVN NPRKMIDTVVSSRTDDEEKREKQVWNKRRQILYTVEKMYSLLLEVQDFEKRFMQTPEEQR EALLEQHKTHTLQLYSSLKEKEWDDRVSDEQCLLIMSVRKGKRLISRLIPFLPPLQAATV VMGIARNLPALAKKDKQDQVLCWLVEPIAVVISSLSSASLTDLLQELQGSEGQLSRVLQN KFGVTLLYLILSEGERMQSSNPTCQLMDDNRWTELVFSVTRELLNVPSSSLSPPLFTPPN LLSLFSRYVDRQRLELLQEKLQISALSR NT seq 2427 nt NT seq  +upstreamnt  +downstreamnt atgttccgttttcagtcccttgatgaagattgtaccctggagaaggaggaggggctggta gaagaagaagatgagattgaccagtttaatgacgacaccttcggagatggggccatcgat gatgactggcaggaggagcacaagcggctagccgagctcgaagaacaaaagaacgatgga ctcggaggtttagggctagggacactagggatggggggtatgggaggaggaaacgcctcc actgttcaccttcctcctcccgccagtcgcgtcccccatccgtcttccctcccaccacca catcactccctctcttcgatgccctctccgggcctggaggagagggtgggaggcgaccta gcagagtccctagccatgttgattctcggggcggacccggccatcgccagtgtggggggt ccagccgggcctgatgaccggtccactggtctccctcctcccccttccattccccagcag catcaccacccctcccagctccctccccaccaccagctgaccccgtctgggctacccccc ggcccaccgcacctctccctgcttagctaccagcagcatcagcaccttctacgacgaggg gcggcccccatgcaacagatgaactctcacaatatctgggagaacaacttgagatttggg cctgtgagcatcacccctggactaatcactcaaatggaggacagtccacttatgtctatc atcaaagaagtggggctgcccaaccggcctccgccaatgatgagcgaggatgggcgggac ttgtcggaaagggcccccccgcctcgctcgtcctctcccgtgattggtagcccaccagtg agggctgtgcctatcgggactccgcccaagcagccgatgagtcatgctatgaatcatcat catcatcagcagatccaccaccccaccgccattcatgtgcgagccccggtccaccaccaa caccgctaccccccttccttccctgagcgcatctctcccaacaccctcttaaacatcgct aactctcctctgtgtcgtcctccgttcccggccggcgtgggccccgttctgtcccagatc caacgcgcccagatgctcaactctcaggttgctggcttccccaggggctgtcagggtccc ccgttgctgcctggtggcggaggcttcaggcccttcttcggccagccccctccccacagg ccccctcccaaccacaaccacgtcccttgtcccatcatccggcacaacaccacgcacctg cacccccagcaccgccgcatgctcacccagaggatgcagagtagaggaggtgagcgtggc gggcgtgttggggactggcggagcagggacccctacagtaacttgatgagccagagggag aaggagtgggtggccaagatccagatgatgcagctgcagagcactgatccctacctggat gactactactaccagaattactttgagaagttggagaagaggcaggagcgagacagagac ggcatgaggaaggagcacaccaccaaactcatcaccccccaggtggccaagctggaacac acctacagaccagtgcagtttgcaggctcgctgggtaagctaactgtgtccagcgtcaac aaccccaggaagatgatcgacacggtggtgtctagtcgcactgatgacgaggagaagaga gagaaacaggtgtggaataagagacggcagatcctctacactgtggagaagatgtacagt ctgctgctggaggtgcaggactttgagaagcgcttcatgcagacgccggaggagcagagg gaggccctgctggagcagcacaaaacccacacgctgcagctctacagctccctcaaggag aaggagtgggacgacagagtgagtgacgagcagtgtctgttgatcatgtcggtgcgtaag ggaaagcgcctcatctccaggctcatccctttcctgcctccgctgcaggccgccaccgtt gtcatggggattgcccggaacctgccagccctggccaagaaagacaaacaggaccaggtg ctgtgctggttggtggagccaattgccgtagtgatctcatccctatctagcgcctccctc acagatttgctgcaggagctgcaaggcagcgagggtcaactgtccagagtgttacaaaat aagtttggtgtgacactgctttacctgatcctgagtgaaggagagcgaatgcagagctcc aaccccacctgtcaactcatggatgacaatcgatggacagagttggtgttctctgtgacc agggagctgctcaacgtgccctcctcgtccctgtcccctcctctcttcactcctcccaac ctgctctctcttttctcgcgctacgtcgaccgacagaggctggagctgctgcaggagaag ttacagatctccgcattgtccaggtag

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