Oncorhynchus gorbuscha (pink salmon): 124001534
Help
Entry
124001534 CDS
T07892
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00061
Fatty acid biosynthesis
ogo00071
Fatty acid degradation
ogo01100
Metabolic pathways
ogo01212
Fatty acid metabolism
ogo03320
PPAR signaling pathway
ogo04146
Peroxisome
ogo04216
Ferroptosis
ogo04920
Adipocytokine signaling pathway
Module
ogo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124001534
00071 Fatty acid degradation
124001534
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124001534
09143 Cell growth and death
04216 Ferroptosis
124001534
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124001534
03320 PPAR signaling pathway
124001534
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogo01004
]
124001534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124001534
Enzymes [BR:
ogo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124001534
Lipid biosynthesis proteins [BR:
ogo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124001534
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124001534
Exosomal proteins of breast cancer cells
124001534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GSG-1
Motif
Other DBs
NCBI-GeneID:
124001534
NCBI-ProteinID:
XP_046164341
LinkDB
All DBs
Position
LG17:45770488..45815435
Genome browser
AA seq
699 aa
AA seq
DB search
MQMQAQDLLRQLQIPELEDVCQYMHSLPANILMGVGALAALTTYWYATRPKALKPPCDLN
MQSVAMTGDGYVRRSILNKNDEHMTHYYSDARTMYEVFLRGMRVSIDRPCLGSRKPNQPY
TWLSYREVADKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISELACYTYSLVCVPLY
DTLGLEAIEYIIDQAAISTVICDLVDKVRLILDCVSGKEHTLKTIVIMEAFDKELVVRGQ
QSGIEILSLKDVEAVGKAYHHQPLPPTPDDLALICFTSGTTGNPKGGMLTHGNVIANCAA
FIKITEVHCMLNLHDIHMSYLPLAHMFERVVEGVILVHGARIGYFQGDIRLLMDDLKTLQ
PTVFPVVPRLLNRMFDKIFGQANAPLKRWLLVFASRRKLAEMMNGVVRKDSLWDKLIFQK
VQDSLGGRVRLMITGAAPVSPTVLTFLRTALGCQFYEGYGQTECTAGCTMSMPGDWTAGH
VGAPLPCNYVKLADVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEALDQDGWLHTG
DIGKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSDPVAQIFVHGDSLQACLVG
IVVPDPDFLPGWAKKKGIEGSYLEMCASKELKNAILEDILRLGKEGGLKSFEQVRDISLH
TEMFSVQNGLLTPTLKAKRTDLRSHFQEQIDLLYATIKM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcaagcccaggacctcctgagacagctgcagatcccagagctggaggatgtg
tgccagtacatgcacagcctgcccgccaacatcctgatgggcgtgggcgcccttgccgcc
ctcaccacctactggtacgccacgcggcccaaggccctcaagccgccctgcgacctcaac
atgcagtcagtggccatgacgggtgatggttacgtcaggcggtccattctgaataaaaac
gacgagcacatgactcactactacagtgacgcacggaccatgtacgaggtatttctccga
ggcatgcgggtgtccattgataggccctgtctaggatcaagaaaacccaaccagccttac
acgtggctgtcataccgagaggtggcagacaaagcagagtgcattggctcggctcttctc
cacagagggcactcccagactggagacaagcatatcggcatcttttcccagaacaggcca
gagtggaccatttcagagctggcctgttacacatactccctggtgtgtgtaccactgtat
gacacgctaggcctcgaggccattgaatacatcatcgaccaagctgccatctctacggtg
atctgtgacttggtggacaaagtgcggctcatcctggactgcgtgagcggcaaggagcac
acattgaagacaatcgtgatcatggaggccttcgacaaggagcttgtggtccgcggacag
cagagcggcatcgagatccttagcctgaaggatgtggaggctgttggcaaagcctaccac
caccagccattacccccaacaccagatgacctggcactcatctgcttcactagtggaacc
acaggaaacccaaagggtggaatgcttacacatggcaatgttatcgccaattgtgctgct
ttcatcaagataacagaggtgcactgcatgctgaacctccacgacattcacatgtcctac
ctacctctagcacacatgtttgagagggtggtggagggagtgatcctggtgcacggtgcc
cggattggctactttcagggggacatccggctcctgatggatgacctgaaaaccctgcag
cccacagtcttccctgtcgtcccccgcctgctcaaccgcatgtttgacaagatcttcgga
caggccaacgcgccactgaagaggtggctgctggtttttgcctccaggaggaagcttgcg
gagatgatgaatggtgtggtcaggaaggacagcttgtgggacaagctcatcttccaaaaa
gtccaggacagtcttgggggtcgtgtgaggctgatgatcacaggagcggccccagtttct
ccaaccgtcctaactttccttcgtaccgcacttggctgccagttttacgaaggctatggt
cagactgagtgcacagctgggtgtaccatgtccatgcctggggactggacagcaggtcat
gtgggggctccactgccctgcaattatgtaaagctggcagacgtgactgagatgaactac
tttgctgccaatggggaaggagaggtgtgtgtaaaaggaccaaacgtattcaagggctac
ctgaatgacccagagaagactaaggaggccttggatcaggatggctggctccacacggga
gacattgggaagtggctgcctaatggcattctgaagattgtggacaggaagaagcacatc
ttcaagctggctcaaggagagtacattgccccggagaaggtcgagaacatctatatccgg
agcgacccggtggcccagatctttgtccatggcgatagcttgcaggcatgcctggtgggc
attgtggtgcctgatccagacttcttaccaggatgggcaaagaagaagggcatcgagggt
tcttatttggagatgtgcgcaagcaaggagttgaaaaatgccattctggaggacattctg
aggctggggaaagaaggggggctgaagtcttttgagcaggtgagagatatctcgctgcac
acggagatgttctctgtccagaacggcctcctgacgcccacactcaaggccaagaggacc
gacctccgcagtcacttccaagagcagattgacctgctctatgcgacgatcaagatgtga
DBGET
integrated database retrieval system
