Oncorhynchus gorbuscha (pink salmon): 124001544
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Entry
124001544 CDS
T07892
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124001544 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124001544 (rbm28)
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124001544 (rbm28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124001544
NCBI-ProteinID:
XP_046164364
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All DBs
Position
LG02:complement(35745731..35753673)
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AA seq
789 aa
AA seq
DB search
MSALTIFVRSLPADASNDRLEEIFSEIGPVKHCFVVKEKGAEKCRGFGYVTYSMEEDAQR
AVREVKDYDGQKINVSVAKKKLNDKKRGTTATAPKDPVPQKEQKSGGLKKNRRKARLIIR
NLSFKCSNEDLKQTFAKFGTVLEANIPLKPDGKMRGFAFVQFKNVLEAGKALNAMNLKEI
KGRQVAVDWAVAKDKFVATQPGAKKEEKVAAEKAAPESDSEEEEKVEEEEKKPEAHSKNN
PLYRVGSKPAQQPDSPSEHESEEDDEEDHEEDEDSESQESDCDETSDLGSDDDDDDDDDD
EDEDSDSAANRKPLPSDINQGKTIFIRNLSFDTEEEGLEEVLLQYGELKYIKICLHPDTE
HSKGIAFAQFKSKEAAEKCIADAEDESESGGIRVDGRKLNIVAAVSREDAVKLKDKKVKT
HTGTRNLYLAREGLIRSGTKAAEGVPAADMAKRTRFEDLKLTKLRDINVFVSKTRLCVHN
LPKFVDVKQLRKLCLKAAGGGKVVRITECRVMYDKKPERGQVLGRSLGYGFVQFQEHEHA
LKTLRYLNNNPDIYGNTKRPIAEFSLEDGKKLKMKEMRQQQVKERFKGQGPQGGVKPQSG
GKTGPQRCASKPQSAMVTKEGPAKTQTQSLPSGQDRKDGVPPPQPQAQTQPQAQTLFQTQ
PQDQKQGRQYAGFQTTPVLEHVELEDGKKRRKVLALPSHRGPKIRARDKGKLQPAQPKKP
KNRPSRREVQGGTSLEKPTQPRTKSAKGAKKRFRNQEDDRFDNLVEQYKRKLMGGNKTTN
IKKNKWFNS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccttacaatattcgtccggagtttgccagcagatgcatctaacgaccgcctg
gaggagatattctctgagattggacctgtgaagcactgctttgttgtcaaggaaaaaggt
gcagagaaatgtcgggggtttgggtatgtcacttactccatggaggaggatgcacagcgc
gctgtgagagaggtgaaagactatgatggacagaagataaacgtgtcggtggccaagaag
aaactaaacgacaagaaaaggggaacaacagccacggcaccaaaagatccagttccccaa
aaagaacagaaatctggaggcttaaagaaaaacagaaggaaagccagactgatcatcagg
aatctcagtttcaagtgctcgaatgaggatctgaagcagacctttgccaagtttgggaca
gttctagaggccaacatcccgctcaaaccagatgggaagatgaggggctttgcgtttgtc
cagtttaagaacgtcttagaggcaggaaaagccttgaacgccatgaacctgaaagagatc
aaaggaaggcaggtagctgtggattgggctgtggctaaagacaagtttgtcgctactcag
ccaggagctaagaaagaggaaaaggttgcagcagagaaagcggcacctgaaagtgactct
gaagaggaggagaaggtggaggaagaggagaagaaaccagaagcacattcaaagaacaat
cctctctacagagtcggctctaagccagctcagcagccagacagcccatcagagcacgag
agcgaagaggacgatgaagaggatcatgaggaggatgaagattcagagtctcaggagtca
gattgcgatgaaacaagtgaccttgggtctgatgatgatgatgatgatgatgatgatgat
gaagatgaggattctgatagtgcagccaacaggaagcccctcccatcagatattaatcag
ggcaaaaccatcttcatcaggaacctatcgtttgatacggaggaggagggcttagaggag
gtgttactgcagtatggagaactgaagtacatcaagatctgcctacacccagacactgaa
cactctaaaggtattgcatttgctcagttcaagtctaaagaagcagcagagaaatgcatt
gctgatgcagaggatgagtcagagagcgggggtatccgtgtggatggtaggaagctgaac
attgtagcggcggtgagcagagaggacgctgtcaaactaaaggacaagaaggttaaaact
catacagggaccaggaacctctacctggctagagagggattgatacggtcaggaacgaag
gcagctgagggtgttccagcagcagacatggccaagaggacccgatttgaggacctgaag
ctgaccaagttacgggacattaatgtgtttgtgtctaagacccgcttgtgtgtccacaac
ctgcccaaatttgtagacgtcaaacaactacgaaaactctgcctgaaagctgcagggggt
ggcaaggtagtccgcattaccgagtgcagggtgatgtatgataagaagccggagcgtggt
caggtgttaggccggtcactaggttacggcttcgttcagttccaagaacatgaacacgct
ctgaagacactacgatacctcaacaacaaccctgacatctacgggaacaccaagaggccc
atcgctgagttctctcttgaagatggaaagaagctgaagatgaaagaaatgcgacaacaa
caagtcaaggagcgtttcaaggggcagggccctcagggaggagtgaaaccgcagtctgga
ggcaagactggacctcagaggtgtgcgtctaaaccccagagtgccatggtaacgaaggag
ggtccagcgaagacacagacacagtcgttaccatccggacaggacagaaaggatggagta
cctcccccccagccacaggcccagacccagccacaggcccagaccctgttccagacccag
ccacaggaccagaagcagggccggcagtatgcaggcttccagaccaccccggttctagaa
catgtagaactggaggatggaaagaaaagacggaaggttctagccctaccttctcaccgt
ggcccaaagatcagggcacgtgataaggggaagctgcagcctgcccagcctaagaagccc
aagaaccggcccagcaggagagaggtacagggaggaacgtcactggagaaacctacacag
cccagaacaaagagcgcaaagggggccaagaagcggtttaggaaccaagaggatgaccgc
tttgacaacctggttgaacagtacaagaggaaactgatgggcggcaacaagaccacaaac
atcaagaagaacaaatggttcaacagttag
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