Oncorhynchus gorbuscha (pink salmon): 124001578
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Entry
124001578 CDS
T07892
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38 isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124001578 (arhgef38)
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124001578 (arhgef38)
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GFIT
Motif
Pfam:
RhoGEF
SH3_9
BAR
SH3_2
SH3_1
Nucleoporin_C
SH3_3
Motif
Other DBs
NCBI-GeneID:
124001578
NCBI-ProteinID:
XP_046164441
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Position
LG17:complement(58968722..58989679)
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AA seq
887 aa
AA seq
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MAGQVPGRGRGHSTCVALAVVQHSTPVALLRLSLPPSLSPSLFLPGWTESTGGEEEGFLV
KMEANNGSEKEKEKEKVVKRRTRPNFLRYMHLERRKTDTIVVANDDIAADIKGDINLGTL
VRRSQSDKTEYSAKLKEKMAPLSPLSSILASPALDPVEVRLRKMSRRSKVIQELVQTERD
FLTDLELCIREVVKPLRDRQVVDVDRLFTNMETVCEVSAALLHRLKEATAEPDPEALVIG
EVFIQAKAALEDVYKIYCYHHDDANSLLKSYEKEEGIKQHFISCVSSLKRIYDQEGKPNL
LDMGSLLIKPVQRVMKYPLLLGELWHATPSDHPDNRPLQEALNAAKIINVNINEFKRRKD
IVMKYKRTEEDGGTLMGKLNKFSIHSIRKKSDRLTGYLKILTGVEPQVRDEVFDKEEKLF
RSLEKAVRQLVKNVHCYLIHIQEMVGVVVQNAADLEDIMKDPDKIDTNGTQHLKNGNNPY
KHFKERMTHLVLAPLSSLQGMFAAPQKLIQKRYDKLLDYCSRLERSPSSSTSSASSSSSS
PSPVSEDQGQVAARRDYAALNAQLVEELQRFNMAAHTILSNCVLCLVTLLKGLMDTACHH
APSIQQLPAPLSNISEVQSSIMEELNNLTVVKDNAQTLIERKVSFEKTKKILAVPEIQRQ
TEGNRARLLDEYPADRLFQLKRKCNGCQEQDVSLLEGELVGLLEDTDPLGSRGRWLVDTG
STQGYVYSSFLKQYNPNRDQGRPGQGTGITEPQQPIVVLDEDFDNLSLFVSGSGRNNSMR
SRSSIPNFSLYNTSSTSLDRCSTPSSLQGDTEPDIHQDVDTEPDNQQFYAVYGFQARCDQ
ELTMQENQHVRILKFSDLGGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcaggtgcctgggagagggaggggccacagtacctgtgtggcgttggcagta
gtgcagcacagtacacctgttgcacttctcaggctctctcttcctccgtccctctctccc
tctctctttctccctggctggacagagagcacggggggagaagaagagggcttcttggtc
aaaatggaggccaacaacggcagtgagaaagagaaggaaaaagagaaagtggtcaagagg
agaaccaggcctaacttcctgcgctacatgcacttggagaggaggaagacggacaccatc
gtggtggccaacgatgacatcgccgccgacattaaaggtgacatcaaccttgggaccctg
gtgcggaggagtcagtcggacaaaacggagtacagtgccaaacttaaagagaaaatggct
cccctgtcccccctgtcgtcgatcctggcctccccggccctcgaccccgtggaggtccgc
ctgaggaagatgagccgcaggtcaaaggtcatccaggagctggtgcagacggagagggac
ttcctcaccgacctggagctctgcatcagagaggtggtcaagcccctcagagacagacag
gtggtggacgtggatcgtctgtttactaacatggagacagtgtgtgaggtgtcggctgcg
ctgctccaccggctgaaggaggccacagctgagccagaccctgaggcactagtcataggg
gaagtgttcattcaggccaaagcagcgctggaggacgtctataaaatctactgctatcac
cacgacgatgcgaactctttactcaagtcctatgagaaagaggaaggaatcaagcaacat
ttcatcagctgtgtgtcatcactgaagcggatatacgaccaagaggggaaacccaacctg
ctggacatgggttctctgctcatcaagccggtccagcgggtcatgaagtaccctctgctg
ctcggggagctgtggcacgccacgcccagcgatcaccctgacaacaggcccctccaggag
gctctgaacgccgccaagatcatcaacgtcaacatcaacgagttcaagaggaggaaggac
atcgtgatgaagtacaagaggaccgaggaggatggggggacactcatgggtaaactgaac
aagttcagcatccactctatcaggaagaagtctgacaggctcacaggatacctcaagatc
ctcacaggtgtggagccacaggtgagagatgaggtgttcgacaaggaggagaagctgttc
aggagtctggagaaagcagtgagacaactagtcaagaacgtccactgttacctgatacac
atacaggagatggtaggtgtcgtggtccagaatgctgcagacctggaggacatcatgaag
gatccagacaaaatagacacaaacggtactcagcacctgaagaacggcaacaacccatac
aagcactttaaagagaggatgacacatctggtcctggcacccctctcctctctccaaggc
atgttcgctgccccgcagaaactcatccagaaacgctacgacaaactattggactactgc
agccgcctggagcgctctccctcctcctccacgtcttctgcctcttcttcttcctcctct
ccatcacctgtatccgaggaccagggccaggttgcggcgcggcgggactacgcagccctc
aatgctcagctggtggaggagctgcagagattcaacatggccgcccatactattttgtcc
aactgtgtcctctgcctggtgaccctgctgaaaggcctgatggacacggcctgccaccac
gcaccctccatacagcaactaccggctcctttgtccaacatcagtgaagtccaaagcagc
atcatggaagagctcaacaacctgactgtcgtcaaggacaacgcacagactctaatagaa
cgcaaagtcagcttcgagaaaacaaagaaaattttagctgtcccagagatccagcgtcag
acagagggtaacagggccaggctgctggacgagtatccagctgacaggctgttccagctg
aagaggaagtgtaacgggtgtcaggagcaggatgtcagcctgctggagggggagctggtg
ggcctgctggaggacacagaccccctggggagccggggccgctggctggttgacacgggc
agtacccagggttacgtgtactcatccttcctgaagcagtacaaccccaacagggatcag
ggtcgaccaggtcagggtacggggatcacagagccccagcaacccatcgtggtgctggac
gaggactttgacaacctcagcctgtttgtgtcgggcagcgggaggaacaacagcatgcgg
agccggagtagcatacctaacttcagcctctacaacacctccagtacctcgcttgacaga
tgctccaccccgtccagcctacagggcgacacagagccagacatccaccaggatgtggac
acagagccagacaaccagcagttttatgcggtgtacgggttccaggcacgctgcgaccag
gagctgaccatgcaggagaaccagcatgtgaggatcctcaagttcagcgacctgggaggc
aacaaggactggtggttggccgaggccaacggacagaagggctacgtcccagccaactac
ctcggcaaaatgtcatacgcataa
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