Oncorhynchus gorbuscha (pink salmon): 124001780
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Entry
124001780 CDS
T07892
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124001780 (wdhd1)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
124001780 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
HMG_WDHD1
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
eIF2A
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
HMG_box
WD40_Gbeta
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
GAGE
Motif
Other DBs
NCBI-GeneID:
124001780
NCBI-ProteinID:
XP_046164791
LinkDB
All DBs
Position
LG17:39322701..39371411
Genome browser
AA seq
1125 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDDVGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKVYSL
ALKNGKLVTAASNNTVQIHTFPEGDPDGILTRFTTNATHITYNSSGSRVAAGSSDFMVKV
VEMYDSSQQKTLRGHTAPILSVTFDPKDEFLASASCDGSVAVWKIEEQTQVTSWPLLQKS
NDVINAKSLCRLAWQPKAAKLLAVPVETTVQLYQRDSWAQVGTLSDDLGTQAINVVAWSP
CGKFLAAGSIGGLLTVWDVESKLCVERQTHEKGYTVCGLVWHPSGGQIAYTDTEGCLGVL
DGLSSSSSTTASSTTTKQAPASYDDLFDADDERPMDEGISEGTRSPPKNPVDEDDDDDLI
PATGRARNRSAFLDDENSLDTGSLKQGLDKFVDDDDAGSAIVPPAAVAAPLRPVYDGPMP
TPPQKAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAVHHAMHLTNSLG
HTVADLSQEAVLLACPGTDELASKLQCLHFSSWDTNKEWMVDLPKGEDVQALCLGQGWVA
AATSALMLRLFSIGGVQRELFSLPGPVVCIAGHGEQLLVVYHRGTGFDGEQALGVQLLQF
GQKRRQVIHGEPLPLSRKSHLSWLGFTAEGTPCFIDSEGVVRLLNRSLGNMWTPVCNTRD
NCKGKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAVLPFKLPLCQTTTEKGQME
EQYWRSVLLHNHYSFLSSSGYEIDEEGQSQAQKEQQELLMKMFALSCKLEREFRSVELAE
LMTQNVVTLAIRYASRSRRMVLAQRLSDLALEKANQLQGEEPQEEEPLQYTRRNTGYSQS
SSEMGADHQHSSHRQAQEEEVDEEQGQEEHMDEGDVAESKRQGLNPFAKGTAASPEKPSP
RPVSKEGRVNPFKVSSGLGRSGSAVGQNRVTNVLDSMMSSSKKPTALQSSSGSMGTLNKT
PFLKPLAPRPKTKTQSTLLHMKAANKKAAEEQEPAVCRLKQTEAPPPASPAENVENKKHK
SGFQLWLEDNRRIILADNPDLEETDVIKEAIGRFRTLSADDRLTWTERAKGQSEDVADMK
KRKRGEGETSRGDKNGQSEADETSAKKKKPLDTSAKLSAFAFNKN
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgaaaggaaaccaatgcgctacggccactcggagggacacactgatgtttgc
ttcgatgacgttggaaagtatatagtcacttgtggaagtgatggggatgtgagaatatgg
gagagtctggatgacgacgatcccaagtccatcaacgtgggggagaaggtctattcttta
gccttgaagaatgggaagctggtcacagcagcctccaacaacacagtacaaatccacacg
ttccctgagggtgacccagatggcatcctcacccgctttaccaccaacgccacccacatc
acctacaacagcagcggctccagagtcgctgccggatctagtgacttcatggtgaaggta
gtggagatgtacgacagcagtcagcagaagaccctgcggggacacactgcacccatcctc
agtgtcacctttgaccccaaggatgagttcctggcctctgctagttgtgatggatctgta
gctgtgtggaagattgaggaacagactcaggtgaccagctggccgctgctgcagaagtcc
aatgatgtcatcaatgccaagtccctgtgccgactggcctggcagcccaaggccgctaag
ctcctggccgttcccgtggagacaacagtgcagctgtaccagagagactcctgggcccag
gtgggcacactctccgatgaccttggcacacaggcaataaatgttgtggcatggtcgccc
tgtgggaagttcttggctgcagggagcatcggaggtttgctgactgtctgggacgtggag
agcaagctgtgtgtggaaaggcagacgcatgagaagggctacaccgtgtgtggactagtc
tggcatccctcgggcggtcaaatagcctacaccgacacagagggctgtcttggtgtactg
gatgggctctcctcttcttcctccactacggcttcctccactacgaccaagcaggctcca
gccagctatgatgaccttttcgacgccgatgacgaaagacccatggacgagggtatcagc
gagggcacacgttcaccccccaagaaccccgtggacgaggatgatgacgacgacctcata
cctgcgacggggcgagcacggaacaggagtgccttcctcgacgacgagaactcactagac
acaggctcgctcaaacaggggctggataagtttgttgatgacgatgacgcgggcagcgcc
atagtgccccccgctgccgtggctgctcccctccggcccgtctatgacgggccaatgccc
acccctccacagaaggctttccagccaggctccaccccggcacacctcatgcaccgcttc
atgatgtggaactcggtgggaattgtgcgcggctacaatgacgaccaggacaacgccatt
gatgtggagttccacgacacagccgtgcaccatgcaatgcacctcaccaactccctgggc
cacaccgtggcagacctctcccaggaggccgtgctgcttgcctgccccggcaccgacgag
ctcgccagtaagctccagtgccttcacttctcatcgtgggacaccaacaaggagtggatg
gtggatctgcccaagggggaggatgtgcaggccctatgcctgggccagggctgggtggcg
gctgccaccagtgccctcatgctgcgcctcttctccatcggaggggtgcagagggagctg
ttcagcctgcctggacccgtggtctgcattgctgggcatggggagcaactgctcgttgtc
taccaccgaggcacagggtttgatggagaacaggccctaggggtccagctgctgcagttt
ggacagaagaggcggcaggtcatccacggggagcccctccccctctcccgcaaatctcac
ctttcatggttaggcttcacagccgagggaaccccatgcttcattgactctgagggtgtg
gtgcgcctgctaaaccgctccttgggaaacatgtggacacctgtgtgtaacaccagggat
aactgcaagggcaagtcagaccactactgggtggtgggagtgcatgagaacccccagcag
ctcaggtgtatcccatgtaaagggtcaaggtatccccccacgttgcccaggcctgctgtg
gccgtccttcccttcaagctacccctctgtcagaccaccacagagaagggccagatggag
gagcagtactggcgctcggtgctcctccacaaccactacagcttcctgtcgtccagcggc
tatgagattgacgaagaaggccagagccaagcccagaaagaacagcaggagctgctcatg
aagatgtttgccctgtcgtgtaagctggagagggagttccgctccgtggagctggccgag
ctgatgacccagaacgtagtgaccctggccatccgctacgcctcgcggtcccgccgcatg
gtcctggcccagcgcctcagcgatctggccctggagaaggccaatcagctgcagggggag
gagccccaggaggaggagccactccagtataccagacggaacactgggtacagccagagc
agcagtgagatgggtgcagatcaccaacacagcagccacagacaagcacaggaggaagag
gtggatgaagagcagggtcaggaagaacatatggatgaaggggatgtagcagagagcaaa
agacaaggtctaaatcccttcgctaaagggactgctgcatcacctgagaaaccttctccc
agacctgtaagcaaagaaggacgtgtgaaccctttcaaggtgagcagcgggttagggagg
tcgggttcggcggtgggtcagaacagggtgacaaacgtcctggacagcatgatgtcgtcc
agcaaaaagcccactgctctgcagagcagctccggctccatggggacactgaacaaaaca
cctttccttaagcctctggctcccagacccaagaccaagacccagtctacactgctgcac
atgaaagcagccaataagaaagcagcggaggagcaggagccggcagtgtgtaggctgaaa
cagaccgaggcaccgcctccagcctcaccagcagaaaatgttgagaataagaagcacaag
tcgggtttccagctgtggctggaggataataggaggatcatcctggctgacaaccccgat
ctggaggagacagatgtcatcaaggaggccattggccgcttcaggaccctgtctgcagac
gaccggctgacctggacagagcgggcaaaaggacagtctgaagacgtggcggatatgaaa
aaacgaaagcgaggagaaggggagacgagcaggggagacaagaacggacagagtgaggca
gacgagaccagtgccaaaaagaaaaagcccttagacacctcagccaagctctcagcattt
gccttcaacaaaaattaa
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