KEGG   Oncorhynchus gorbuscha (pink salmon): 124001809
Entry
124001809         CDS       T07892                                 
Name
(RefSeq) signal recognition particle 54 kDa protein isoform X1
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03060  Protein export
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    124001809
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ogo02044]
    124001809
Enzymes [BR:ogo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     124001809
Secretion system [BR:ogo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   124001809
  Eukaryotic Sec-SRP protein
   124001809
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 CbiA NPHP3_N AAA_17 DUF2209 ResIII AAA_33 MeaB SRPRB AAA_22 AAA MobB AAA_19 APS_kinase AAA_30 nSTAND_NTPase7 ATP_bind_1 AAA_16 Zeta_toxin Thymidylate_kin AAA_31 Torsin AAA_18 ArsA_ATPase
Other DBs
NCBI-GeneID: 124001809
NCBI-ProteinID: XP_046164850
LinkDB
Position
LG17:35183400..35194187
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVLMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
EVSSVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFTKQPNRIARVARGSGVAIRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggtgttagccgacttgggaagaaaaataacctcggcgttgcgatcactgagcaatgcc
accatcatcaatgaggaggtattaaatgcaatgctgaaagaggtatgtgctgccctccta
gaagctgatgtcaacatcaaattggtgaagcagctcagagaaaatgtcaagtcagccatt
gacctggaggagatggcctctgggctgaacaagaggcgaatgatccagcattctgtgttc
aaggagctggtcaagctggtggatccaggtgtcaaggcatggacacccacaaagggaaag
aacaatgtcctcatgtttgtgggtcttcagggcagtgggaaaaccacaacatgttccaag
ctggcgtactactaccaaagaaaagggtggaaaacctgtttgatatgcgctgacactttt
agagctggtgcttttgatcagttgaagcaaaatgcaacaaaagccaggattccattctat
ggaagttacacagagatggaccctgtcgtcatagctgcggaaggtgtggaaaagtttaag
aatgagagctttgaaataattattgttgataccagtggtcgacacaagcaagaagattcc
ctttttgaggagatgttacaggtttccaatgcagtgcaacccgacaacattgtgtacgtg
atggatgcctccattggtcaagcttgtgaagcacaggctaaagccttcaaagacaaagta
gaagtttcctcagttatagtgacaaagctagatggccacgccaaaggtggtggtgctctc
agtgcagtggctgctactaagagtcccatcattttcattggtactggtgaacacattgat
gacttggagccatttaagacccaacccttcatcagcaagctactgggcatgggagacatt
gaaggtttgatcgacaaagtcaacgaactgaagctggatgacaacgaggagttgattgac
aagttgaaacatggtcagttcactcttagagacatgtacgagcagtttcagaacatcatg
aagatgggaccgtttggccagatcatgggtatgatcccaggtttcggaacggacttcatg
agcaaaggtaacgagcaggagtccatggccaggttgaagaaactcatgacaattatggac
agcatgaatgaccaagaacttgacaacaaagacggtgcaaagcttttcaccaagcagccg
aaccgaattgcccgagttgcgcggggttctggggttgccatcagggatgtccaggagctg
ctcacccagtacacaaaattcgcccagatggtgaagaagatgggtggcatcaagggcttg
ttcaaaggtggtgacatgtccaagaatgtcaacccctctcagatggctaagttaaaccaa
cagatggcaaagatgatggacccaagggttctccaccatatgggtgggatggctggtctc
cagtccatgatgagacagttccaacagggtgcagctggcaacatgaaggggatgatggga
ttcaacaacatgtga

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