Oncorhynchus gorbuscha (pink salmon): 124001940
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Entry
124001940 CDS
T07892
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04080
Neuroactive ligand-receptor interaction
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124001940
04082 Neuroactive ligand signaling
124001940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124001940
Ion channels [BR:
ogo04040
]
Ligand-gated channels
GABA-A
124001940
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
124001940
NCBI-ProteinID:
XP_046165064
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Position
LG17:11607852..11638030
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AA seq
487 aa
AA seq
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MCTMQVDTVLVLFCVCLMGVSGRSAHQRGDKLETYKQSRSRRETSRMDDGGAHSKTASPI
LKRGPDMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTM
TLYLRHYWKDERLSFTSTNNQSMTFDSRLAKKIWVPDMFFVHSKRSFIHDTTTDNVMLRV
YPDGNVLYSLRITVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTD
ERISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSW
VSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVI
EYAAVNYLSTVQERKERKLRQRLPCTCGIGNPDDAMCDPQITGYTTMDVNSIGNYGTARN
YGMPENGGRQERMFAQVVLGDPQLTGQVKRPGYVNIWIDTHAIDKYSRMVFPGSYVLFNI
IYWSIYS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccatgcaggtggatactgtgttggtgctgttctgtgtctgcctcatgggggtt
tctgggagatcagctcatcaaagaggtgacaagctggagacctacaaacagagcagatcc
aggagagaaacatcaagaatggatgatggaggagctcacagcaagaccgcaagcccaatc
ctaaaacgaggtccagacatgacaaaatctcccatgacaaaatctgagcagctcttaaga
atagatgaccatgactttaccatgagaccagcatttggaggaccccctattccagttggg
gtagatgttcaggttgaaagtctggacacaatctctgaagtggatatggacttcaccatg
accctgtacctgaggcactactggaaggacgagcgcctgtccttcaccagtaccaataac
cagagcatgacctttgacagcaggctggccaagaagatctgggttcctgacatgttcttc
gtccactccaagaggtccttcatccatgacaccaccacggacaacgtcatgctgagggtg
taccctgacggcaacgtgctttacagtctgagaatcactgtcacggccatgtgcaacatg
gacctgagtcgcttccctctagacacacagacctgctcgctggaaatagagagctatgca
tacacggacgatgatctcatgctgtactggaagaaaggcaacgagtcactgaacacagac
gagaggatatctttatcccagttcctcatccagaagtttcacaccactacaaaactggcc
ttctatagcagtacaggctggtacaaccgtctgtacatccacttcaccctgcgacgtcac
gtcttcttcttcctgctccagacctacttcccagccaccctcatggtcatgctgtcctgg
gtctccttctggattgaccgccgggccgtccccgctagggtccctttgggtatcaccaca
gtgctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagagtgtcctac
atcaaagcggtggacatctacctgtgggtcagtttcgtgtttgtcttcctctcggtcata
gagtatgccgcggtcaactacctctctaccgtgcaagaaaggaaagagaggaaactaaga
cagaggttgccgtgtacatgtggcatcggaaaccctgacgatgccatgtgcgacccccag
atcactggttacaccaccatggacgtcaacagcatagggaactatggcaccgcaaggaac
tatgggatgccggagaacggaggcaggcaggagaggatgtttgcccaggtggttctgggg
gatccccagctcacgggccaggtaaagaggccaggctatgtgaacatttggatagacacc
catgccatagacaagtactcacggatggtcttccctggttcctacgtcctgttcaacatc
atctactggtccatctactcctaa
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