Oncorhynchus gorbuscha (pink salmon): 124002018
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Entry
124002018 CDS
T07892
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124002018
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124002018
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
C2-set_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
Motif
Other DBs
NCBI-GeneID:
124002018
NCBI-ProteinID:
XP_046165187
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Position
LG17:32810006..32866784
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AA seq
793 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFSDLENLRALHVNSNRLTRISNDTFS
GMSKLHHLILNNNQLMLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLHTLSLDH
NMIDYIPEETFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNPSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVLE
GQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSPDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVNPSVSKQAMGGSGSEG
GGGGSIKAAGHAPDTLTDSSETSLQDCSTATSLVSQSWNTPGSSGSLKPKRKPAPKPSAT
ASVTPEPKIEALPNAETQNTNRNNSTALQHPPSPVFHSPLPYSRIKDTPILRRAHPRPIS
KYLTLPVEGVRAKRRYSLNEDSSKHHCYIGVTKLGNMWSKRSKSMNGMLLQQENIDSGKA
TISSSEWILESTV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaatcttgcaaccctctgtgccaaaaaa
ggtctcctctttgtccccccgaacattgacaggcacaccgtggagctacggctggcagac
aacttcgtcaccagcatcaagaggaaagactttgccaacatgaccaggttgcaggacctc
accctgtcaaggaataccattagcttcatcacgccacacgcgttttctgacctggagaac
ctccgcgccttgcacgtgaacagcaaccgactgacccggatatccaatgacacctttagc
ggcatgtccaagctgcaccacctgatcctcaacaacaaccagctgatgttgatccacctg
ggggctttcaatgatctgctggccctggaggagctcgacctgtcctacaacaacttggag
tccatcccctgggaggctatccagaggatgacgagcctccacacccttagcctggaccac
aacatgatcgactacattcctgaggagaccttttctcttctgcaaaagctcaaccgcttg
gacgtaacctcaaataagttacagaagcttcctccagatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaacccttcctcgttcgcactgagcttcggcgggaac
ccactgcactgcaactgtgagttgctgtggctgaggcgcctgagtcgagaggatgatctg
gagacatgcgcatcgccgcagcacctctctggacgctatttctggtccatcccagaggag
gagttcctgtgtgaacctcctctcatcacccggtactcccatgagatgagggtgctggag
ggccagagggtggccctgaggtgcaaggccaggggggaccctgagcctgccatacactgg
atctctccagaggggaagctggtgtcgaactcctcccggacgttggtctacacgaatgga
accctggacattttgatcagcactgtgaaggacacaggatccttcacctgcatctcgtcc
aacccagctggtgaggcacatcagactgttgagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcttcagacatctccacgtcc
accagggctggggcaaatggcagcaaccacactggagacaccaaaacgagtccggataag
agagtggtcatcgctgaggccacatcctccacagcactcatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctt
gtgtacagaatgattccccccacaagcaaaaacttcctagtcaataacctggctgctgga
acgtcgtatgacctgtgtgttctggccatatacgacgacggtatcacctcactcaccgcc
acccgcgtggtgggctgcgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tccgtcctcgtcttcatcatcatcctcatgatccgctataaggtctgcaacaccagtgac
tcgggcaaaggcacattggtcaccaacgtccactcccagaccaatggggcgcagtctcaa
gggtgcaccgtcaatccctctgtgtccaaacaggccatgggagggtcagggtcagaggga
gggggaggagggtctataaaggccgctgggcacgcgccagacactctgacggactcatct
gagacctctctccaagactgctccactgctacttctctggtgagccagagctggaacacg
cctggctcctcagggtctctgaagccaaagcgcaagcctgcgccaaagccctccgctact
gcttctgtcacccctgagcccaagatagaggccctccccaacgctgagacccagaacacc
aaccgcaacaactccacggctctgcagcatcccccttccccggtatttcactcccccctg
ccctactcacgcatcaaggacacgcccatattaagacgcgcacaccccagaccaatctcc
aagtacctgaccttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgag
gactcgtccaagcaccactgctacattggggtaacaaaacttgggaatatgtggtctaag
cggagtaagtccatgaatgggatgctacttcaacaggaaaatatagacagtggcaaggcc
accatttccagttcagagtggattctagaaagtactgtgtga
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