Oncorhynchus gorbuscha (pink salmon): 124002041
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Entry
124002041 CDS
T07892
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124002041
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124002041
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GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_31
HTH_37
Motif
Other DBs
NCBI-GeneID:
124002041
NCBI-ProteinID:
XP_046165207
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Position
LG17:complement(14222593..14258041)
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AA seq
557 aa
AA seq
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MISPVNLLVVRMSRYTDEPRFTIEQIDLLQRLRRTGMTKPELIHALDILERLDHQHGHKF
GRRPQPAYQGPTPNYNTNSTSSSASSSTSTTATQTGYLENGSGSGGNGLSPSPSNNYDMS
PPPPAVVSDPVAMAVVAQNGHGVGGGDELVAMTNGKLSPPRFPDSVGAVSGGVTGSGYGF
EASEEELDVDDKVEELLRRDSAIIKEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQ
GSDLSEQKKRAFYRWYQLEKTTPGATLTMRPAPLALEDVVELRQTPPPISSTPGSFRLRR
GSRFTWRKECLSVMESYFNENQYPDEAKREEISNACNAVIQKPGKKLSDLEKVTSLKVYN
WFANRRKEIKRRANIEAAILESHGIEVQSPGGHSNSDEIDGNDFSDQGCEVPLFEKRAVT
RPFSLSRRDLSSPTQVPTLLPSWLAAWPGSGRGGLAVQRASSLICRSLLSGASLAQGAGT
EGSRLTGVSWSAPSPPSLQDNSSTNHSNAQEHQDPITLAVEMAAVNHSILALATQAGGGL
ALGGTGNDIKTEVVEPN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgattagcccagttaatttattagttgtcaggatgtctcggtataccgacgagcctcgt
ttcaccattgagcagattgacctgctccagcggctgaggaggacagggatgaccaagcca
gagctcattcacgccctggacatcctggaaagactggatcaccagcacggacacaagttc
ggacgccgtccccagcccgcctatcagggaccgacgcccaattacaacactaattcaaca
tcttcttcggcgtcctcatcaacgtccacgaccgccacacagactggttacctggagaat
gggagtggaagtggtgggaatggcctgtcgccatcgcctagcaacaactatgatatgtca
ccgccccctccggcggttgtatccgacccggttgctatggcagtggtggcgcagaacggg
catggggttggtggcggcgatgagctggttgccatgacgaacgggaagttgtctccacca
cggtttcctgacagtgtaggcgcggtgagtggcggcgtgacggggagcggctacgggttt
gaagccagcgaggaggaactcgacgtggacgacaaagttgaggaactcctgagaagggac
agtgccataatcaaggaggagatcaaggcattcctggggaacaggcgcatctctcaggca
gtggtggctcaggtcacaggtatcagtcagagtcgtatctcccattggctgctgcagcag
ggctcggaccttagcgaacagaagaagagggccttctaccgctggtaccagctggagaag
accacccctggtgcaactctgacgatgcgaccagcccccttggctctggaggacgtggtg
gagttgcggcagactccgccccctataagctccacccccgggagcttccgtctgcgcaga
ggcagtcgctttacctggaggaaagaatgtctgtctgtgatggagagttacttcaatgag
aaccagtaccctgatgaagctaaaagagaggagatctctaacgcctgcaacgctgtcatc
cagaaaccagggaagaagctgtctgatctggagaaggtcacgtctctgaaggtctacaac
tggttcgccaaccgccgcaaagagatcaagagacgtgccaacatagaagcagcaatcctg
gagagccatgggattgaagtccagagccctggaggacactccaacagcgacgaaatcgac
gggaatgacttctctgaccagggctgtgaggttcctctgtttgagaagagagctgtgacc
agacctttcagtctcagtcgacgagacctgtcctctcccacacaggttcccaccctgctg
ccaagctggctggcggcttggcccggctcgggcagggggggcttggccgtccagagggcc
agctctctgatttgccgatccttgctctcgggagcgagtctcgctcagggggcggggaca
gagggttccagactgacgggtgtgtcctggtctgccccctcccccccctccctccaggac
aactcctccaccaatcacagcaatgcccaggagcaccaggatcccatcactctcgcagtg
gagatggcggccgtcaatcatagcatcctcgccctggccacgcaggcggggggaggattg
gccctgggcgggacaggcaatgacatcaagaccgaggtggtggagcccaactag
DBGET
integrated database retrieval system
