Oncorhynchus gorbuscha (pink salmon): 124002195
Help
Entry
124002195 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124002195
03036 Chromosome and associated proteins [BR:
ogo03036
]
124002195
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124002195
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124002195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
AAA_30
Motif
Other DBs
NCBI-GeneID:
124002195
NCBI-ProteinID:
XP_046165494
LinkDB
All DBs
Position
LG17:18289051..18368002
Genome browser
AA seq
1475 aa
AA seq
DB search
MPREMATSMDIVEDFPPPPPEMLAEEVPYADEEEGEQFEFDDSGDEFPEADRPPHAPPTP
DYGGKAQINGVAPHPQQEGPDPRPSNPETTAAAALDTDTVAAEPPVPVAMATTDTVASAP
DPPVANSPTETTAPVAAAEGDKTSSVPAGADRDLPPPPPPEDSTPVGTDSVNTNKDVSSD
DPPPAVPRTTSQRKVNPYSVIEITPLQLEQLEQQHGPVPTSSSPVERVGGEGEREGKGQD
VPPASPLCVPPGYSVPVPCGYATPSGVPLITPAYTTPVIIRHFSVDEEDTVVGTGNISVD
IEEYPAIREEDALSKWVSDPANTAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGE
EGCGSSLDNGWSSSEFESYDEQSDGEGRGENGLPDAFMRGKPPQRKTHLSQDLTRLKEHY
EKKMKDLMANTVGTVELQQIKQKHEQKMQKLVKAARDGTKDGLEKTKAAVRRGRSYIKTH
CHERKSTCFEDEESELFIEVECFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKNYLDA
LKRILEQYEKPLLEIEPRLLSDRKLKVTFYRIREILQCHALFQIALACRVAEWDSLEMIG
DVFVASFSKSMVLDAYCEYVNNFSTAMAVVRKTCASKPSFLDFLKQRQDISSDRVTLYGL
MMKPIQRFPQFILLLQDMLKNTPAGHSDRLPLQMALTELETLAEKLNEKKREADQRCEIR
HIAKAMNERYLNKLLSNGSRYLIRSDDIVETVYNDHGEVIKTKERRLFLLNDVLMCATPN
VRCSLDGSGSGNATLGQKFLLKWSVPLSFVDVVKFGSSEDMGDNSRFTPQPHSGEKVIIN
AKPNKLYMGPGQLYQDLQNLIHDLSLVNQISSMIGSLKGNYQNVNPAVAHDWVSGLQRLI
LKKEEEIRAADRCRIQLQLPGKPDKSGRPTYFSAVFNTFSPAIKQSWISNLQMAKLALEE
DNLQGWFFAEDDGNQIKKQKHPLLLRQMPVVMSKLQEFKVECAVHNPEPHINIESTADTP
ALGHGCVWVASCTNQMGQIAIVAMQNSSPKVTECFNVESRILCMAYVPMEQRTQENGEGN
PENNHSSAGKTSDAPTVCLGMEEGSIIVYKSSQRSKKVRLQHLFTPDKSTVTSLVHKKQC
LYTGLVNGSVTIYSRAQDGSWNPDSPKVLKLGVLPVKAMLAVEEHVWASSGGQVFIISTT
THTVERQLEAHQEEGMVVSHMVVAGVGIWIAFSSGSTLRLFHTETLEDLQDINIATPVHN
ILAGNQRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKF
LTMAAAVCNRPSGSPGHSLPSQPGGTKDGEKAQASPPPTPGSTPTLAPTQGRGVWLGEAG
CTSMALQDSLSSSCGSLALSQGSLEHGLEDGAIYDLVNDPAHHQRGRRVQRVDVSSLLVV
SGGLGHHRVNRKTKQSRQEETVSNIMVWQIPLLNM
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaatggcaaccagtatggacattgtggaagacttccctcccccgcctcct
gaaatgttggcggaagaggtgccctatgccgatgaagaagagggggagcagtttgagttt
gatgacagtggggatgagttccctgaggcagaccggccaccccatgcccctccaacccca
gactacgggggcaaggcccagatcaatggtgtggcacctcacccacagcaggaaggacca
gacccccggccctccaacccggagaccacagcagcagcagcattggacacagatacagtg
gcagctgaaccaccagttccagtagccatggctacaacagacacagtggcatcagcaccg
gatcctccggtagccaattctccaacagaaacaacagctccagtggcagcagcagaaggg
gacaagacttcatctgtcccagctggcgcagaccgtgacttaccccctcctccaccccca
gaggactccactcctgtaggaacagactctgtgaacacaaataaggatgtgtccagtgat
gaccctcccccggccgtccccaggaccacctcccagaggaaagtcaacccctactctgtg
attgaaatcacccccctccaactagagcaactggagcagcagcatgggcccgtccctacc
tcttcctcaccggttgagagagtaggaggagagggggagagggaggggaagggccaggat
gttccccccgccagccccctctgtgtccctccgggctactctgtgcccgtgccctgtggg
tacgccaccccctctggtgtgcccctcattacgccagcctacaccacgcccgtcatcatc
cgacacttctccgtggacgaggaggatactgtggtggggacaggcaacatttctgttgat
attgaagagtatcctgccatcagagaggaggatgctttgtctaaatgggtgtcggaccct
gcaaacacagcctggatggaaaatccagatgaagtcatttatgatgacgtgcccagagag
aactctgactccactacagagccagacgagatgatctatgatgatgtggagtttggggag
gagggctgtggcagctccctggacaacggttggagttccagcgagtttgagagctatgac
gagcagagtgacggggagggccgcggggagaatggcctgcctgacgccttcatgagaggg
aagcccccacaaaggaagacccatctttctcaagatctgacacgcttgaaagaacactat
gagaaaaagatgaaagatcttatggcaaatacagtgggaacagtagagctgcagcagata
aaacagaaacacgagcagaagatgcaaaagctggtgaaggcagcgagagatgggacaaaa
gacggcctggagaaaaccaaagcagcagtgagaaggggaaggtcgtatatcaagacccac
tgtcacgagaggaagtcaacctgttttgaggatgaggagtcggagctattcatcgaagtg
gaatgcttcaacatggagccagtgctcagtcccgtccctgaggggctctcacaacaacag
gtggtgaggaggtgtatactgggctccatattagagagtgagaagaactatctcgatgca
ctgaagcggattttagagcaatatgaaaagccacttttggagattgagcccaggttgcta
agcgataggaagctgaaggtgacattctatcgtatccgggagattctccagtgccatgcc
ctgttccagatcgccctggcgtgccgcgtggccgagtgggacagtctggagatgatcggg
gacgtctttgtagcctcgttctccaagtccatggtgctggatgcctactgtgagtatgtg
aacaacttcagcacagccatggcggttgtcaggaagacgtgtgcttccaaacccagcttc
ctagacttcctcaagcaacgtcaggacatcagcagtgaccgggtcactctctatggactc
atgatgaagcccatccagagattccctcagttcattctactgctgcaggacatgttgaag
aacacaccagcaggccacagtgacagactgcccctacagatggccctgacagaactggag
accctggctgaaaagctcaatgagaagaagcgggaggctgaccagcgctgtgagatcaga
cacatagccaaggccatgaacgaacgctacctcaacaagcttctgagtaatggcagccgc
tacctgattcgctctgatgacatagtggagacggtctacaacgaccacggagaggtgatc
aagaccaaggagcgacgcctattcctgctcaacgacgtgctcatgtgtgccacgcccaac
gtccggtgcagtttggatggcagtggtagtggcaacgccaccctgggtcagaagttcctg
ctgaagtggagtgtccctctgagctttgtggacgtagtcaagtttggctccagtgaagac
atgggtgacaacagccgcttcaccccacaaccccactctggagagaaggtgatcatcaat
gccaaaccaaataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctc
atccacgacctcagcctggtcaaccagatctccagcatgatcggaagcctcaagggaaac
taccagaacgttaaccctgcggtggcccatgattgggtgtcaggtctgcagcgtctcatc
ctgaagaaggaggaagagatccgggctgcagaccgctgtaggatccagctgcagctgcct
ggcaaaccggacaaatctggcaggcccacatacttcagtgcagtgttcaatacgttctct
cctgccatcaaacagtcatggatcagtaacctgcagatggccaagcttgctctggaggaa
gacaacctgcagggctggttctttgcagaggatgatggtaaccagatcaagaagcagaaa
catcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggagttcaaggtg
gagtgtgcggtccataaccccgagccccacatcaacatagagagcacagcagacacccct
gctctgggacacggctgtgtgtgggtggcgagctgcaccaatcagatgggtcagatagcc
atcgtagccatgcaaaactccagccccaaagtgacagagtgcttcaatgttgagtcacgg
atcctgtgtatggcgtatgtacccatggagcagaggacccaggagaacggggaggggaac
cccgaaaataatcactcctcagcagggaagaccagtgatgcccccacggtctgtctgggc
atggaggagggcagcatcatagtctataagagcagccagagatccaagaaggtccgtcta
caacacttgttcaccccagacaagtctaccgtgaccagcctggtacacaagaagcagtgt
ttatacactggcctcgtgaacggctcagtcaccatctactccagagcacaagatggctcg
tggaatccagactctcctaaggtgctgaagctgggggttctgccagtgaaggccatgcta
gctgtggaggaacatgtctgggcttcctctggaggacaagtcttcatcatcagcactacc
acacacactgtggagaggcagctggaggcccaccaggaggagggcatggtggtatcccac
atggtggtggctggggtgggtatctggatagccttcagctctgggtccaccctcagattg
ttccacacggagacgctggaggatctacaggacatcaacatcgctacgcctgtacacaac
atactggctgggaaccagagggtctcagtcagcagtctactggtgtgccatggtctgctg
ctggtggggaccaacctgggggtgacagtggccctctctgtccccagactacagggaatc
cccaaggtcacaggacggggcatggtatccttccacgcccaccatggcccagtaaagttc
ctcaccatggcagcagcggtgtgcaaccggccctctggcagcccaggccacagcctacct
agccagccaggaggcaccaaggacggggagaaggcccaggcctccccacctccaacccca
ggctccacacccactctagctcccacccagggccggggagtgtggctgggggaggcaggc
tgcacttccatggccctccaggactccctgtcctcctcctgtggctccctggctctgtcc
cagggctctctggagcacgggctcgaggacggggccatctatgacctggtcaatgatccg
gcccaccaccagaggggcaggagggtccagagggtggacgtcagctctctgctggtggtt
tcaggggggctgggtcaccacagggtcaacaggaagaccaaacagtcccgtcaggaggag
acggtgtccaacatcatggtgtggcagatccctctactcaacatgtga
DBGET
integrated database retrieval system
