KEGG   Oncorhynchus gorbuscha (pink salmon): 124002448
Entry
124002448         CDS       T07892                                 
Name
(RefSeq) neurofascin-like isoform X1
  KO
K06757  neurofascin
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124002448
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ogo04515]
    124002448
Cell adhesion molecules [BR:ogo04515]
 Immunoglobulin superfamily
  L1 family
   124002448
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 Ig_4 C2-set_2 Ig_VEGFR-1-like_5th Ig_6 BiPBP_C DUF3792 Dicty_REP Mucin
Other DBs
NCBI-GeneID: 124002448
NCBI-ProteinID: XP_046165780
LinkDB
Position
LG18:36904810..37073012
AA seq 1360 aa
MLVQGGPWALSVISLVLLLWQELSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSPLVLACNPPPGLPPPLTFWMDSA
MMPITQDKRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQTKEPY
NDTSSVNSTDPYGGRKVAETTPNFLSPTGTDSSRMVMRGEKLKLECIASGVPTPSIKWFK
KGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYWLDQP
SNLVLAPDENGRLVCRANGNPKPHIQWLVNGGPIDSNSSLPNPSRTVAGDTIMFRSVQIG
SSAVYQCNASNDHGYLLANAFISILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGSPLPE
LRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDQGTYTCVASNILGKEENQVRLEVKEP
TRIVRAPEHQSAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSLGSRLKKDEDSLSIPN
VHEGDEGTYTCTVKTEIDQDTASARLTVSEDASLSSVLPTDRPDSPTDLELSDAKERNIR
LTWIHGDDHNSPVTLFVVQFEEDRWESGKWQNLSSYPGDFNTVILELSPFVNYQFRVIAV
NSVGQSLPSLPSQRYQTSGAPPDVIPRGLKGWGTKKNNMEISWEPLLDTERNGPNLHYSV
WWRRKDTGEEWSNVTTVGAKHIVHDTETYVPYEIKLRAVNDFGPGGESNIIIGYSGEDKP
TAPPTDLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWREGSMVKGLRVNKEKKTKG
FYSTVAQPTGILTDLQPYSHYRIYMVVANNRYEGPPSNHVEFRTKEGVPEAPKFFKIIQR
STDVIHLEWDKPLEPNGILIGYKLNYQTVNGSRVGLMQMQSFLPNVTTYTLRLPERAIRY
KFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTDVSVSTTFPPPPPTTTAATTTIST
STTTPPTTTTTTTTTTTTTTTTTAATTATTPVLVTSTKQAHTNVLVGMAPGSVIWNLTVE
PNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSSVPVNQPPIKLAGLIEGAKYHLRVYS
NEYHSISSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKY
PVREKKDLPLDAVDQKGEDGSFDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDG
QFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgttggtgcagggggggccttgggccctgtctgtcatatcactggtcctgctgctgtgg
caagaattgtctgctatcgatgttcctctcgattcaaagatccagcaggacctgaagcag
cctcccaccattatgaaacagtcgttgaaggactacattgttgatcccagagataacatc
atcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaatgtggggaaggatccgcgggtgacgatgcggaagcgctcaggaacgctg
gaaatcagcttccggagcggagggaggcctgaggactacgagggggaataccagtgtttt
gcctccaacgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtct
cctctgtggcctaaggaggtgttggagccagtggtagtgggtgagggatctcccctggtc
ctggcctgtaaccctcctcctggtctgccccctccgctcaccttctggatggatagcgcc
atgatgcctataacccaggacaagcgtgtgtccatgggtctgaatggagacctgtatttc
tctaatgtgctggctaaagactcccacacagactacagctgcaacgcccgattcctcttc
acacacactatccagcagaagaaccccttcacactcaaagtgcagaccaaggagccgtat
aatgacacttcctctgtcaactccactgacccgtacggtggtcgtaaggtagcagagacc
acccctaacttcctctcccccacggggactgacagctcgaggatggtgatgagaggagaa
aagctaaagctggagtgtatcgcttccggagttccaactcccagtataaagtggtttaag
aaggggggagacctgaaccagaaggtgaaactagacaacttcaataagactctgcgcatc
gacagtgtgtcagaggaggacgcaggggagtacatgtgtatggccaacaatcagatagga
agcatccgacactccatctacgtccaggttaaagcggctccctattggctggaccagccg
tccaatctggtgctagcaccggatgagaacggtcgtctggtgtgtcgggccaatggaaac
cccaaacctcacattcagtggctggtcaacggagggccgatcgacagcaatagctccttg
cccaaccctagcagaacggtggcaggtgacaccatcatgttccgctccgttcagatcggc
agcagcgctgtgtaccagtgtaatgcatccaatgaccatggttacttgctggccaacgca
ttcattagcattctggacatggcccccagaatgctgggtccgaagaaccagctgataaag
gtgatagagaacaacagaaccttcctggactgtccctattttggctcgccacttcctgag
ctacgctggtttaagaatggtcaaggaagtggtctggacggtggtcactatcgggtctac
atcaacgggaccctagagatcaagcgtgcacgggctgaggaccaggggacctatacctgc
gtggccagcaacatcctgggcaaggaggagaaccaggtccgcctggaggtcaaagagccg
acacgtattgtcagggctccagagcaccagtcagccatcagaggcaccatggctcgtttc
gactgccgggtcaaatcagacctcaccctgcccatcactgttacctggctgaaggatgac
aagcctctctccctgggatcgaggttgaagaaggatgaggattctctgtccatccccaat
gtccatgagggagatgagggaacatacacctgcactgttaaaacagagattgaccaagac
actgcctcggcacgccttactgtgtcagaggacgcctccctgtctagtgtcttgcctaca
gaccgtcctgactctcccacggacctggagctgtctgacgctaaagaacgcaacatacga
ctcacctggatacatggagatgatcacaacagccccgtcacattgttcgtggttcagttt
gaggaggaccgttgggagtcaggcaagtggcagaacctgtctagttatcccggagacttc
aacactgtcatcctggagctctctcctttcgtcaactaccagttcagagtcatcgctgtc
aattctgtgggccagagcctccccagccttccctcgcaacgataccagaccagcggagcc
cctccagatgttatccctagaggcctgaaaggctggggcaccaagaagaacaacatggag
atcagctgggagcccttgttggacacagagcgaaacggccctaacctgcactactcggtg
tggtggcgacgtaaggacacgggggaggaatggagtaatgtgactacagtgggtgcaaag
cacattgtccacgacacagagacctacgtaccctatgagatcaaactgcgggctgtgaat
gactttggaccgggaggcgagtccaatatcatcataggatactctggggaggacaagccc
acagcccctcccactgacctgcgagtgtctaagattgacagcaccaaggtcaatgtccac
tggaccccagtagatcccagcactgtattgggagagttcaaggagtacagggtgtactac
tggcgtgagggcagcatggtgaaaggtctgcgtgtgaataaagagaagaagactaaaggg
ttctacagtaccgtggcccagcctactggcatactgacagacctacagccatacagccac
taccgcatatacatggtggtcgccaacaatcgctacgagggaccgcctagcaaccatgtg
gagttccgtaccaaggaaggagtgccagaagctcctaagttctttaagatcatccagcgg
agtacagatgttatccacctggagtgggacaaacccctggagcctaacggcattctgatt
ggatataaactcaactaccagacagtgaacgggtcgcgtgtaggccttatgcagatgcag
agtttcctacctaacgtgacaacgtacacactccgcctgcccgaacgagccatccgctat
aagttctacctggcggccctcacacaggtgggagcaggggaggtctatgctgaggagtct
ccacacttcaccaatgaggaagactttttcagctcagtcgagcctacagatgtgtccgtg
tctacaactttccctccacctcctcccactactaccgctgctactacaaccattagtacc
tcaactactactccccctaccactactaccactactaccactactaccactactactact
accactactgctgcgactactgctaccactcctgtgctggttaccagcaccaagcaagca
catacgaatgtgttggtaggcatggctcctgggagtgtgatctggaacctgacggtggag
cctaacagtaactacgctaacgtcagctggaaccacaacttcccggccggcagcagcgag
ttccagctagagttcacactggacagcaacggcagtatgtcaagcgtacctgtgaaccag
ccgcccattaagctggcgggactgatcgaaggggccaagtaccacctgagggtgtactcc
aacgaataccacagcatctccagcaatgttgtcacctttgagaccagtgcagcctacagt
aaagaccaggtggacattgctacccagggctggttcatcgggctgatgtgtgcaattgct
ctcatcatcctcatcctcctcatcgtctgcttcatcaagaggagtcgcggaggcaaatac
ccagtgcgcgagaaaaaagatctccctctggatgcagtggatcagaaaggagaggatgga
tcatttgactaccacagcgacgaggacaacaagcctctgcagggcagccagaactctctg
gacggcggggtgaaggagagtgacgacagcctggtagactacggcgagggaggggatggc
cagttcaacgaggacggctccttcattggccagtacacagtcaagaaggacaaggacgaa
acagagggcaatgaaagctcagaggccacctcacccgttaacgccatctactcgctggca
taa

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