Oncorhynchus gorbuscha (pink salmon): 124002448
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Entry
124002448 CDS
T07892
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124002448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124002448
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
L1 family
124002448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
C2-set_2
Ig_VEGFR-1-like_5th
Ig_6
BiPBP_C
DUF3792
Dicty_REP
Mucin
Motif
Other DBs
NCBI-GeneID:
124002448
NCBI-ProteinID:
XP_046165780
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All DBs
Position
LG18:36904810..37073012
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AA seq
1360 aa
AA seq
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MLVQGGPWALSVISLVLLLWQELSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSPLVLACNPPPGLPPPLTFWMDSA
MMPITQDKRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQTKEPY
NDTSSVNSTDPYGGRKVAETTPNFLSPTGTDSSRMVMRGEKLKLECIASGVPTPSIKWFK
KGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYWLDQP
SNLVLAPDENGRLVCRANGNPKPHIQWLVNGGPIDSNSSLPNPSRTVAGDTIMFRSVQIG
SSAVYQCNASNDHGYLLANAFISILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGSPLPE
LRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDQGTYTCVASNILGKEENQVRLEVKEP
TRIVRAPEHQSAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSLGSRLKKDEDSLSIPN
VHEGDEGTYTCTVKTEIDQDTASARLTVSEDASLSSVLPTDRPDSPTDLELSDAKERNIR
LTWIHGDDHNSPVTLFVVQFEEDRWESGKWQNLSSYPGDFNTVILELSPFVNYQFRVIAV
NSVGQSLPSLPSQRYQTSGAPPDVIPRGLKGWGTKKNNMEISWEPLLDTERNGPNLHYSV
WWRRKDTGEEWSNVTTVGAKHIVHDTETYVPYEIKLRAVNDFGPGGESNIIIGYSGEDKP
TAPPTDLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWREGSMVKGLRVNKEKKTKG
FYSTVAQPTGILTDLQPYSHYRIYMVVANNRYEGPPSNHVEFRTKEGVPEAPKFFKIIQR
STDVIHLEWDKPLEPNGILIGYKLNYQTVNGSRVGLMQMQSFLPNVTTYTLRLPERAIRY
KFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTDVSVSTTFPPPPPTTTAATTTIST
STTTPPTTTTTTTTTTTTTTTTTAATTATTPVLVTSTKQAHTNVLVGMAPGSVIWNLTVE
PNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSSVPVNQPPIKLAGLIEGAKYHLRVYS
NEYHSISSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKY
PVREKKDLPLDAVDQKGEDGSFDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDG
QFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgcagggggggccttgggccctgtctgtcatatcactggtcctgctgctgtgg
caagaattgtctgctatcgatgttcctctcgattcaaagatccagcaggacctgaagcag
cctcccaccattatgaaacagtcgttgaaggactacattgttgatcccagagataacatc
atcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaatgtggggaaggatccgcgggtgacgatgcggaagcgctcaggaacgctg
gaaatcagcttccggagcggagggaggcctgaggactacgagggggaataccagtgtttt
gcctccaacgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtct
cctctgtggcctaaggaggtgttggagccagtggtagtgggtgagggatctcccctggtc
ctggcctgtaaccctcctcctggtctgccccctccgctcaccttctggatggatagcgcc
atgatgcctataacccaggacaagcgtgtgtccatgggtctgaatggagacctgtatttc
tctaatgtgctggctaaagactcccacacagactacagctgcaacgcccgattcctcttc
acacacactatccagcagaagaaccccttcacactcaaagtgcagaccaaggagccgtat
aatgacacttcctctgtcaactccactgacccgtacggtggtcgtaaggtagcagagacc
acccctaacttcctctcccccacggggactgacagctcgaggatggtgatgagaggagaa
aagctaaagctggagtgtatcgcttccggagttccaactcccagtataaagtggtttaag
aaggggggagacctgaaccagaaggtgaaactagacaacttcaataagactctgcgcatc
gacagtgtgtcagaggaggacgcaggggagtacatgtgtatggccaacaatcagatagga
agcatccgacactccatctacgtccaggttaaagcggctccctattggctggaccagccg
tccaatctggtgctagcaccggatgagaacggtcgtctggtgtgtcgggccaatggaaac
cccaaacctcacattcagtggctggtcaacggagggccgatcgacagcaatagctccttg
cccaaccctagcagaacggtggcaggtgacaccatcatgttccgctccgttcagatcggc
agcagcgctgtgtaccagtgtaatgcatccaatgaccatggttacttgctggccaacgca
ttcattagcattctggacatggcccccagaatgctgggtccgaagaaccagctgataaag
gtgatagagaacaacagaaccttcctggactgtccctattttggctcgccacttcctgag
ctacgctggtttaagaatggtcaaggaagtggtctggacggtggtcactatcgggtctac
atcaacgggaccctagagatcaagcgtgcacgggctgaggaccaggggacctatacctgc
gtggccagcaacatcctgggcaaggaggagaaccaggtccgcctggaggtcaaagagccg
acacgtattgtcagggctccagagcaccagtcagccatcagaggcaccatggctcgtttc
gactgccgggtcaaatcagacctcaccctgcccatcactgttacctggctgaaggatgac
aagcctctctccctgggatcgaggttgaagaaggatgaggattctctgtccatccccaat
gtccatgagggagatgagggaacatacacctgcactgttaaaacagagattgaccaagac
actgcctcggcacgccttactgtgtcagaggacgcctccctgtctagtgtcttgcctaca
gaccgtcctgactctcccacggacctggagctgtctgacgctaaagaacgcaacatacga
ctcacctggatacatggagatgatcacaacagccccgtcacattgttcgtggttcagttt
gaggaggaccgttgggagtcaggcaagtggcagaacctgtctagttatcccggagacttc
aacactgtcatcctggagctctctcctttcgtcaactaccagttcagagtcatcgctgtc
aattctgtgggccagagcctccccagccttccctcgcaacgataccagaccagcggagcc
cctccagatgttatccctagaggcctgaaaggctggggcaccaagaagaacaacatggag
atcagctgggagcccttgttggacacagagcgaaacggccctaacctgcactactcggtg
tggtggcgacgtaaggacacgggggaggaatggagtaatgtgactacagtgggtgcaaag
cacattgtccacgacacagagacctacgtaccctatgagatcaaactgcgggctgtgaat
gactttggaccgggaggcgagtccaatatcatcataggatactctggggaggacaagccc
acagcccctcccactgacctgcgagtgtctaagattgacagcaccaaggtcaatgtccac
tggaccccagtagatcccagcactgtattgggagagttcaaggagtacagggtgtactac
tggcgtgagggcagcatggtgaaaggtctgcgtgtgaataaagagaagaagactaaaggg
ttctacagtaccgtggcccagcctactggcatactgacagacctacagccatacagccac
taccgcatatacatggtggtcgccaacaatcgctacgagggaccgcctagcaaccatgtg
gagttccgtaccaaggaaggagtgccagaagctcctaagttctttaagatcatccagcgg
agtacagatgttatccacctggagtgggacaaacccctggagcctaacggcattctgatt
ggatataaactcaactaccagacagtgaacgggtcgcgtgtaggccttatgcagatgcag
agtttcctacctaacgtgacaacgtacacactccgcctgcccgaacgagccatccgctat
aagttctacctggcggccctcacacaggtgggagcaggggaggtctatgctgaggagtct
ccacacttcaccaatgaggaagactttttcagctcagtcgagcctacagatgtgtccgtg
tctacaactttccctccacctcctcccactactaccgctgctactacaaccattagtacc
tcaactactactccccctaccactactaccactactaccactactaccactactactact
accactactgctgcgactactgctaccactcctgtgctggttaccagcaccaagcaagca
catacgaatgtgttggtaggcatggctcctgggagtgtgatctggaacctgacggtggag
cctaacagtaactacgctaacgtcagctggaaccacaacttcccggccggcagcagcgag
ttccagctagagttcacactggacagcaacggcagtatgtcaagcgtacctgtgaaccag
ccgcccattaagctggcgggactgatcgaaggggccaagtaccacctgagggtgtactcc
aacgaataccacagcatctccagcaatgttgtcacctttgagaccagtgcagcctacagt
aaagaccaggtggacattgctacccagggctggttcatcgggctgatgtgtgcaattgct
ctcatcatcctcatcctcctcatcgtctgcttcatcaagaggagtcgcggaggcaaatac
ccagtgcgcgagaaaaaagatctccctctggatgcagtggatcagaaaggagaggatgga
tcatttgactaccacagcgacgaggacaacaagcctctgcagggcagccagaactctctg
gacggcggggtgaaggagagtgacgacagcctggtagactacggcgagggaggggatggc
cagttcaacgaggacggctccttcattggccagtacacagtcaagaaggacaaggacgaa
acagagggcaatgaaagctcagaggccacctcacccgttaacgccatctactcgctggca
taa
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