Oncorhynchus gorbuscha (pink salmon): 124002456
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Entry
124002456 CDS
T07892
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124002456
Enzymes [BR:
ogo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
124002456
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124002456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
124002456
NCBI-ProteinID:
XP_046165817
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All DBs
Position
LG18:complement(17590819..17601528)
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AA seq
539 aa
AA seq
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MLPLKEKDRPIVKKLLEAGCCARCVLRFCCLGVQSAYRQSYEDTARELCAFVSDSENNES
QDAAVLEQHKEDPPSKKMKMDAAKTDVQSEGDSAVVATVMEEGDAEPADSDVCVVCLGVL
QQFCDEAYAIKISEVVKAKNYQFDTMVLSVSLPAQLSVREHSCWLHVKKEVREKSMCLDM
DDVIQVKEAFKWTMQGLVSKELGGIPVVTKINRQTEQFEVGVGFTHPETDSDCHFLAGIC
SDCFRPTKNKQNVFTRMAVVKALEKVSDEKFLKKFPCPPTRPASKCIAQDVQCLHVSVFV
AGRYNKFSRTLPQTPWVIDGERRMESSVEELIAAPLLSSFRAEGFNFSSSGREDVDVRTL
GNGRPFALELLNPHRARFNKAEVQQLQETINQSSDKIRVRDLQIVSRDAMGHMKEGEEDK
TKSYTALIWTQKAINKDDITFLEETKELKLAQKTPLRVLHRRPLAVRERVIHTMSTCFLD
AHHFHLKLRTQAGTYIKEFVHGDFGRTKPNLCDLLKTETDILELDVESVDVDWPPSIPE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttgaaggagaaagatagaccaatagtgaagaagctgctggaagcaggatgc
tgcgcccgctgtgtcctgaggttctgctgcttgggtgtgcagtcggcctaccgccagtct
tatgaggatacagcaagggaactttgtgctttcgtcagtgattcagagaataacgaatcc
caagatgcagccgtgctggagcagcacaaagaagacccccctagtaaaaaaatgaagatg
gatgccgcaaagacggacgtccaatcagaaggcgactctgctgtggttgccacggtgatg
gaggaaggcgacgccgagccagcggactcggacgtgtgtgtggtgtgcctgggagttcta
cagcagttctgtgatgaagcctatgccataaagatatcggaggtggtgaaggccaaaaac
taccagtttgacacaatggtactgtccgtctccctaccggcccagctgtctgtcagagag
cactcttgttggctgcatgtaaagaaggaagtgagggagaagtctatgtgcctcgatatg
gatgatgtcattcaggtgaaggaggctttcaagtggaccatgcagggtctggtgtccaaa
gagctggggggcatacctgtggtaaccaagatcaatcgacaaactgaacagtttgaggtg
ggcgtggggtttacacacccagagacagactcagactgccacttcctggctggcatctgt
tcagactgcttcagaccaactaagaacaaacagaatgtcttcactagaatggccgtggtc
aaagccctcgagaaggtttctgatgagaagtttctaaaaaagttcccatgtccccctaca
aggccagcgagcaaatgcatcgctcaagacgtccagtgtcttcacgtttctgtatttgtg
gcggggaggtacaacaagttctcccgcaccctgccccagaccccctgggtgattgacgga
gagaggaggatggagtcctcggtggaggagctaatcgctgcccccctcctctcttctttc
cgggccgaggggtttaatttctcctcctcaggaagggaggacgtggatgtgcggacactt
ggaaatggtcgtccgtttgcactggagctgctaaatcctcacagagccaggttcaataag
gcagaggtccaacagctgcaggagaccatcaaccagtcctctgacaaaatccgagtacga
gatctacagatcgtaagcagagatgctatgggccacatgaaggagggtgaggaggacaag
accaagtcgtacaccgccctcatatggacccagaaagccatcaacaaagacgacatcaca
ttcttagaggaaaccaaagagttgaagctagctcagaagacgccactaagagtgttgcat
cgcaggccgctggccgtcagggagcgcgtcatccacaccatgagtacatgcttcctggac
gcgcatcacttccacctgaagctgcgcacgcaggcagggacttacatcaaggagtttgtc
cacggagactttggtcgcaccaaacccaatctgtgtgatctgctgaagactgagactgat
atcctagagctggacgttgagtctgtagatgtggactggccaccctccatcccggagtga
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