Oncorhynchus gorbuscha (pink salmon): 124002463
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Entry
124002463 CDS
T07892
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124002463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124002463
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124002463
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124002463
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
124002463
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
124002463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
124002463
NCBI-ProteinID:
XP_046165833
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All DBs
Position
LG02:41653984..41665440
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AA seq
1206 aa
AA seq
DB search
MQHLLHLLPFRGPLSSVLRRRLCCTSYSTQQPHSLQGSLPPETRLNPLNIQMLSQNLHEQ
IFRGAEQEYEDEKVERSIRHLQRHQLWGKEASLLPGVELQLPHMYGENINDHFRLLAQKQ
SLPYLEAASKLQQAPLPPMPQDWVWEVGWMRYGPGGEAKRVDFPDEAGLVFDVEVCMAEG
HCPTLAVAVSPTAWYSWCSKRLIEERYSWSSQLTPADLIPMETPTNSSRPPGGQWRERLI
VGHNVSFDRSYIKEQYLLKGSKARFLDTMSLHMAISGLTGFQRTLWMANKHGKRRGLLEV
KAHMKKVGRPGRKEGPMIGSWDWVNISSINNLADVHALYVGGEPLQKEAREIFVKGSMAD
VRNNFQELMQYCALDVQATHQVFCEQLPLFMERCPHPVTFAGMLEMGGCYLPVNQNWGRY
LEDSQDTFEELQREMKKSLMSLADDACQLLQDDRYKEDAWLWDVEWDVQEFKQKKVTVSK
RKSSKAEAEPAPSTPLRDWDQDPGPPTEEEIAGTCPSREALERLKKMVSRLPKRRQHLPG
HPGWYRKLCVKMSEEEESWSPGASLISLAMRVTPKLMGLTWDGFPLHYTEQHGWGYLVPG
RRDNLMEPHGEEEDAMGPVCPHRAIESVYREYCEQKGKEQPRCLDNGLSDDLMLTDSTLW
QTVEELGRLESVSEEENGGRVTRKSNKEMQDINSLPGESHCPYHHGNGPYNDVNFPGCWF
FKLPHKDGNDNNVGSPFSKDFLSKMEDGTLRAGRGATNATRALEINKMISFWRNAQKRIS
SQKVVWLRKGELPRSVSRHEEYDEEGQYGAILPQVITAGTVTRRAVEPTWLTASNARRDR
VGSELKAMIQVPPGYHLVGADVDSQELWIAAVLGEAHFGGMHGCTAFGWMTLQGKKSQGT
DLHSRTADTVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLSQPEAASKARQMYALT
KGLRRYRLSEEGEWLLKELDVEVERDEDGSISPQDLRRITRLASQSSRRRKWEVAGQRLW
AGGTESEMFNKLESIALSAQPATPVLGCRISRALEPQAVKDEFITSRVNWVVQSSAVDYL
HLMLVAMRWLMEEHDIDGRFCVSIHDEVRYLVRSEDRYRAALALQITNLLTRCMFTHALG
MQDLPQSVAFFSAVDIDRCLRKEVTMDCVTPSNPTGLERKYGLPQGEALDIYQIIDITKG
SLGKGR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcttctgcatcttcttcccttccgggggcctctctcctctgtcctacggagg
agactatgttgtacctcctactccacccagcagccccactccctccagggctccctcccc
ccagagacccgcctgaaccccctcaatatccagatgctgtcccaaaacctccatgagcag
atcttccgcggcgcagagcaggagtacgaggatgagaaggtggagcggagcatcaggcac
ctacagaggcaccagctgtggggaaaagaagcctccctgctgcctggtgtggagctccag
ctgccccacatgtacggggagaacataaacgaccacttccgcctgctggcccaaaagcag
agccttccctacctggaggctgccagtaagctccagcaggccccgctgccacccatgccc
caggactgggtgtgggaggtgggctggatgcgctacgggccgggtggggaggccaaacgg
gttgacttcccagacgaggcaggcctggtgtttgacgtggaggtgtgcatggcagaggga
cactgtcccacgctggctgtggctgtatcccctactgcctggtactcgtggtgcagcaag
cgtctgatagaggagagatactcctggtccagccagctgacccctgctgacctcatcccc
atggagaccccgaccaactccagccgccctccggggggccagtggagggagagactgatt
gtgggtcacaacgtcagctttgaccggtcttacatcaaggagcagtacctgctgaagggg
tccaaggctcgtttcctggacaccatgagtctccacatggccatctctggtctgactggg
ttccagcgcacgctgtggatggccaacaagcacggcaagaggcgtggcctcttggaggtc
aaagcgcatatgaagaaagtgggccgacctgggcggaaggaagggcccatgatcggctca
tgggactgggtgaatatcagcagcatcaacaacctggctgatgtgcatgctctgtatgtg
ggaggggagccactgcagaaggaggccagagagatctttgtgaagggcagcatggctgac
gtcaggaacaacttccaggagctgatgcagtactgcgctctggacgtccaggccactcac
caggtgttctgtgagcagctgcccctcttcatggagaggtgccctcatccagtaacattt
gcagggatgctggagatgggcgggtgctacctacctgtcaatcagaactgggggaggtac
ctggaagactctcaagacacgtttgaggagctgcagagagagatgaagaagagtctgatg
agtcttgcggatgacgcttgtcaactgctacaggacgacaggtataaggaggacgcctgg
ctttgggatgtggaatgggacgtccaggagttcaagcagaagaaggtgactgtcagcaag
agaaaaagctcaaaggctgaggctgagccagcacccagcacaccattgagagactgggat
caggacccaggtccccccactgaggaggagatagcaggaacgtgcccaagtagggaggct
ctggagaggctgaagaagatggtcagcaggctgcctaagaggagacagcacctgcctgga
catcctgggtggtatcgtaagttgtgtgtgaagatgtcggaggaggaggagagctggtcg
ccgggggccagcctgatcagtctggctatgcgggtgactcccaagctgatggggctgacg
tgggacggcttccccctgcactacacggagcagcacggctggggctacctggtgcctggc
cgcagggacaacctgatggaaccccatggggaggaggaggacgccatggggcctgtgtgt
ccccacagggccatagaaagtgtgtacagagagtactgtgagcagaaaggtaaagagcag
cctaggtgtctggacaacggcctctctgatgacctcatgctaaccgacagcacactgtgg
cagacggtggaagagttgggtcgcttggaaagtgtgtcagaggaggagaacggtggcagg
gtgacgaggaagagcaataaggaaatgcaggatattaattctctaccaggtgagagtcac
tgtccctatcaccatggaaatggaccttacaacgatgtcaactttccgggctgctggttt
ttcaaactcccacacaaggatggaaatgacaacaacgtgggcagccctttctccaaggac
ttcctgtccaagatggaagacggcaccctgagagcggggcggggggccaccaacgccacc
cgggctctggagataaacaagatgatctctttctggaggaatgcccagaaacgcatcagc
tctcagaaggtggtgtggctgaggaaaggggagctccctcgcagtgtcagcaggcatgaa
gagtatgatgaggaggggcagtacggcgccatcttgccccaggtcatcaccgcaggaacc
gtcacccgcagggctgtggagccaacgtggctgactgccagcaacgctcggcgggatcga
gtgggcagtgaactgaaggccatgatacaggtgccccctgggtaccacctggtgggagcg
gacgtggactcccaggagctctggatcgctgccgttctaggagaggcccactttggtggc
atgcatggctgcacagcgttcggctggatgaccctgcagggcaagaagagccagggcact
gacttgcacagccgcacggctgacacggtgggcatcagccgcgaacatgccaaggtcttc
aactacggacgcatctacggcgctgggcagcctttcgccgagcgtctgctcatgcagttc
aaccaccgcctcagccagccagaggccgccagcaaggcccggcagatgtatgccctcacc
aagggcctacgcaggtaccgtctgtctgaggagggtgagtggctgctgaaggagctggat
gtggaggtggagagggacgaagatgggagcatctccccgcaggatctccgccggatcaca
agactggcctcccaaagttctcggaggaggaagtgggaggtggcgggccagcgtctgtgg
gctggtggtacggagtcagagatgttcaacaagctggagagcatcgccctctcagcccag
ccagccacccctgtcctgggctgcaggattagcagagccctggagcctcaggctgtcaag
gacgagttcatcaccagcagggtgaactgggtggtgcagagctcggcggtggactacctc
cacctgatgctggtggccatgcgctggctgatggaggagcacgacatcgacggacgcttc
tgcgtcagcatccacgacgaggtacgctacctggtccgcagcgaagaccgctaccgggca
gcactggccctgcagatcaccaaccttctcacaagatgtatgtttacccatgcactgggt
atgcaggacctgcctcagtcagtggccttcttcagtgccgtggacattgaccgctgtctg
aggaaggaggtgaccatggactgtgtgactccctccaaccccacagggctggagcgcaaa
tacggcctcccacagggtgaggctctggacatataccaaatcatagacatcaccaaaggc
tctctggggaaagggagataa
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integrated database retrieval system
