Oncorhynchus gorbuscha (pink salmon): 124002577
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Entry
124002577 CDS
T07892
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124002577
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
General mRNP proteins
124002577
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
CDC45
RBD_DEAH11
RRM_7
RSRP
Presenilin
Motif
Other DBs
NCBI-GeneID:
124002577
NCBI-ProteinID:
XP_046166034
LinkDB
All DBs
Position
LG18:complement(34382289..34410823)
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AA seq
556 aa
AA seq
DB search
MSAGNKTQQQYFRTRVHFSQHIKCAIIMADDFDIEAMLEAPYRKDEIKPSSPNGHEERSK
KKKKSRSRSKDRKRSKSRDRKKSHDHKRSRSRERKRSRSKERRRSRTRSRERSGRYRDHK
TTFSGPKFNGGSRGKIGPPPVIKLSRRRSRSRSPFKKEKSPVRQPIDNLTPEERDARTVF
CMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQ
RLLGVPIIVQASQVMAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFG
RIESIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERTDAST
ASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVS
AAMNPAMNMNLNMNMNTAMNLPSQPLATHCFQLSNMFNPQSEDDPGWDVDIQHDVIEECN
KHGGVVHIYVDKNSTEGNVYVKCPTIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLF
PDSVTATQLLTPPARR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggggaacaagacgcagcaacagtattttcgaactcgcgtacatttttctcag
cacatcaagtgcgccatcatcatggctgatgactttgatatagaagcaatgcttgaggct
ccgtatagaaaggatgagatcaagcctagtagtcccaatggccatgaggagcgcagcaag
aagaaaaagaagagcaggagccgaagcaaagaccggaagagaagcaagagccgtgatcgc
aagaagagccatgaccacaagaggagccgcagccgcgagcgaaagcggagccgcagcaag
gagaggcgccggagccgcactcggagcagggagcgcagtggccgctacagggaccacaag
actaccttctctgggccgaaatttaacggtggttccagagggaagattggccctccacct
gtcatcaagctaagccgaaggcgttccagaagccgaagccctttcaagaaagagaagagt
cctgtgaggcagccaattgacaacctgactccagaggaaagggatgctcgcactgtgttt
tgcatgcagctggcagccagaatccgtccacgagacctggaagagttcttctctgcagtg
ggaaaagtgagagatgtgcgcatgatctctgacagaaattcgaggaggtcgaagggaata
gcttacattgagtttgtggaggccaactctgtgccgctggctataggattgtctggtcag
cgacttctgggggtgccaatcattgttcaggcctcgcaggtaatggctgagaaaaacagg
gctgctgccatggccaacaacctgcagaagggtaacgctggcccgatgaggctctacgtc
ggatccttacactttaacatcacagaggagatgctgagaggaatttttgagccttttgga
aggattgagagtattcagctcatgatggacagtgagactggaagatctaaaggatatggc
ttcatcactttctcggatgcagagtgtgccaagaaggccctggagcagttgaacgggttt
gagctggctggccggcccatgaaggtgggccatgtcacggagcgcacagatgcctccact
gccagttcattcctggacagcgacgagctggagaggacgggcattgacctaggcaccacc
gggcgcctgcagctcatggccagactggctgaaggcacgggactgcaaatacctccagct
gcacagcaagccctacagatgagtggggccattgctattggtgccatggctgctgtatca
gctgccatgaatcctgctatgaacatgaacctgaatatgaacatgaatacagctatgaac
ttgccatcccagccacttgctacacactgtttccagctgtctaacatgttcaaccctcag
tctgaagatgacccaggctgggatgttgacattcagcatgatgtcattgaggaatgcaac
aaacatggaggagttgtgcacatatacgtcgataagaattccactgaaggcaacgtgtat
gtgaagtgtccaaccattcctgctgccatggctgcagtaaacgcattacatggtcgatat
tttgcaggtaaaatgatcacagcggcatacgtccctctcccgacatatcacaaccttttt
cctgattctgtgacggctacccagctcctgacccctcctgctcgccgatga
DBGET
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