Oncorhynchus gorbuscha (pink salmon): 124002578
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Entry
124002578 CDS
T07892
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124002578
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124002578
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
LMBR1
DUF16
FlaF
Fez1
Phage_H_T_join_2
Filament
Motif
Other DBs
NCBI-GeneID:
124002578
NCBI-ProteinID:
XP_046166039
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All DBs
Position
LG02:43058547..43139059
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AA seq
1005 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKSMDYSNSLFDCQSPTSPFLGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLEMCLDEHREKLNATEEMLQQELLCRTTLETQKLDLMDEVS
NLKLKLNSFEKDILHFDFGDSEDVGLEINELRYKVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRNEHKMQALKEELVTLRRQLEGRDREVRRLHGETGFRANTPGGMDC
GDRVSHPDETLKKRLKEKHVEVQRMKKVVESLMAANEEKDRKIEELRQALQRYKKVQDMV
MSVQEKKDKTKDGESDESNSDNFLSVMSTTTTPVALESERHALAGVEEVGVKSPDELETH
YGATEVPSATTRPTVQSACALSVPELNQAEPERSLRVPKSASQDNLYVSNSEKITLVIDE
KPTENKAVEDIGKISERPPRSPSSSRPEDDSFGTKKARSSFGRGFFKIKGGKRTASTPNL
AETVREGGTDHLDLAGLPQRSAISDSTNTLTSVTSTTSPEGKKKSRGIKALFGKLRRSQS
TTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNTDLDTPFARWSKEQVCDWLQE
QGLGLYLNMAHVWISSGQTLLQASQQDLERELGIKHPLHRKKLQLALQALGSEEDDNKGK
LDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQV
LRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLM
VLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQDYLENPDYTLLTATA
KVKLRKMTFGSFGSLRKKRQDESEEYVCPMDVEMPKGRSFQKGYELYEDDLDRLEQMEDS
EGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagctttggagcagatggatgggataata
gcaggctctaagtccatggactactccaacagcctgtttgactgccagtcaccaacctct
cccttcttgggaagcctgcgggcactgcacctgctggaggacctccggggtgtgctggag
ctgatggacaccgaggagagggagggccttcgctgccagatccctgatgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggccaccacatttccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gaaatgtgtctggatgaacaccgggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgactctagagactcagaaactggacctaatggatgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacatactgcactttgacttcggggac
agtgaagacgtgggtctggagattaatgagctgaggtacaaagtgactgagatggagagt
gaaagactacagtatgagaagaaactgaaatccactaagtcgctaatggccaagctttct
agcctgaaaatcaaagtgggccagatgcagtatgagaaacagaggaacgagcacaaaatg
caggcactgaaggaggagctggtgacgctgaggaggcagctggagggaagggacagagag
gtgaggaggttacacggcgagactgggttcagagccaacaccccgggtggcatggactgt
ggagacagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagtggtggagtcactgatggcagctaatgaggagaaggat
cgtaagattgaggagctgaggcaggcgctgcagcgctacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgatgagagtaacagc
gacaacttcctctctgtgatgtcaacgacaaccaccccggttgccctggagtcggagagg
cacgcgctcgctggagtcgaggaagtaggagtgaagagcccagacgagctggagacgcac
tatggagctactgaagtgccttcggcaacaacccgccctacagtccagtcagcctgcgct
ctgagcgtgccagagcttaaccaagctgaacctgagaggtccctgcgtgtcccaaagtca
gcgagtcaggacaacttgtatgtcagcaacagtgaaaagattacattggtgattgacgaa
aagccaacagagaataaggctgtggaggacatcggtaagatcagcgagcgcccgcccagg
tctccctcttcatctcgcccagaggacgacagcttcggtaccaagaaggctcgctcctcc
tttggccgaggcttcttcaagatcaaggggggcaagaggacagccagcacccctaacctg
gctgagaccgtgcgagaggggggcactgaccatctggacctggccgggctaccccagagg
tcagccatcagcgacagcaccaacacactgaccagtgtgacctccactacctctcccgag
ggcaagaagaagtccaggggaatcaaggcactctttggaaagctgaggagaagtcagtcc
accacgttcaacctggatgacaacctatcagagccggtcgagttcaagaggggcggagtc
cgggccacagcaggacccagactgggatggtcccgggacctacagcaatcacccaacact
gacctggacaccccgtttgcccgctggtccaaggagcaggtgtgtgactggctgcaggag
cagggactgggactctacctgaacatggcccacgtgtggatctcttctggacagactctg
ctgcaggcctcacagcaggatctagagagggagctgggcatcaaacacccgctgcacagg
aagaagctccaactggccctgcaggctctgggctctgaggaggatgacaataagggcaaa
ctggactacaactgggtgaccagatggctggatgacattggcctgcctcagtataagacc
cagtttgatgaagggagggtggacggccgcatgctgcactatatgacagtagatgacctg
ttgtctctgaaggtgggcagtgtactccaccacctcagcatcaaaagagccatccaggtg
ctgcgcctcaacaactacgagcccaactgcctgcgccgacggccctccgatgagaacaat
atcacaccagcagagatctcccagtggaccaatcacagagtaatggagtggctgagatca
gtagacctggcggagtacgcccccaacctgaggggcagcggcgtgcacgggggactcatg
gtgctggagcctcggttcaatgtggagaccatggccctgctgctgaacattccccccaac
aagaccctgctgcggaggcacctggcaacccacttcaacctgctggtgggatctgaggcc
caggggctcaaacaggattatctagagaaccccgactacaccctgcttacagccactgcc
aaggtcaagctgaggaagatgacgtttgggagctttggcagcctgagaaagaagaggcag
gatgagagtgaggagtatgtctgccccatggacgtggagatgccaaagggacgtagcttc
caaaaaggctatgagctctacgaggacgatctggaccggctagaacagatggaggactcc
gagggaactgtgaggcagattggagccttctctgagggcatccagaacttgacgagcatg
ctgaaagatgatgaattcttcaaagagatctctaactctcccaaccccagcgtaacagat
gacgattccaacgtttga
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