Oncorhynchus gorbuscha (pink salmon): 124002580
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Entry
124002580 CDS
T07892
Name
(RefSeq) homeobox protein TGIF2-like isoform X1
KO
K19553
homeobox protein TGIF2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124002580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124002580
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124002580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
124002580
NCBI-ProteinID:
XP_046166042
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Position
LG18:complement(25287391..25296007)
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AA seq
296 aa
AA seq
DB search
MKSFKRVLEEERMREQELSAMSDSDPFEDDRSILDLSGGGSGKRRRRGNLPKAAVQVLRS
WLYEHRFNAYPSEQEKLSLSDQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTQFTISR
RAGKGEGRPATGGFGSAPESPTSVHSPALPPLRPSVIQPAPTLDLSLLGNTATAILLGAG
YPSQEGYCVQALMQLDMQSLLRREAEENGSKVISASPTGGLFNTPPPTPPELCPCQDFSD
LRLLVDAALQRAAEHESQRLLPEYQSRATAEATGGCSHSSSVPSFSSNPCPSLFCT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccttcaaacgagttctggaagaggagcggatgcgagagcaggagctgtcagcc
atgtctgacagtgacccctttgaggatgaccgctccatccttgacctgtctggtgggggc
tcgggcaagcggcgtcgccgtggcaacctgcccaaggcggcggtgcaggttctgcggagc
tggctgtacgagcaccgcttcaacgcctacccctcagagcaggagaaactcagcttgtca
gatcagaccagcctttctgtgctacagatatgcaactggttcatcaatgcccgccgccgc
ctcctccccgaccttctccgcaaggatggcaaagaccctacccagttcaccatctccagg
cgggcggggaagggcgagggccgcccagccactggaggatttggcagtgcccctgaaagc
cccacctcagtccactctccagccctgccccctctcaggccctctgtcatccaaccagcc
cccacactggacctcagcctcctaggaaatactgccactgccatccttttgggcgctggc
taccccagccaagagggctactgtgtccaggccctgatgcagttggacatgcagagtctc
ctgaggagggaggccgaggagaatggctcaaaggttatcagcgccagccccaccggcggg
ctattcaacacgccgccccccacgcctccggagctgtgcccctgccaggatttcagtgac
ttgaggttgctggtggatgcagctctccagagggccgccgagcacgagagtcagaggctg
ctcccagagtaccagagcagggccactgcagaagcgacgggtggctgtagccacagcagc
agtgtccccagtttcagttctaatccatgtcccagtctgttctgcacctaa
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