Oncorhynchus gorbuscha (pink salmon): 124002696
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Entry
124002696 CDS
T07892
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1 isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124002696 (samd1b)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
124002696 (samd1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
124002696
NCBI-ProteinID:
XP_046166308
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Position
LG18:3693974..3705047
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AA seq
724 aa
AA seq
DB search
MWPTHAHIEASVVHSPLCRARSLLALGRYRRATYSVTSETTREKRRTRPNPNSTAGKTTT
TMSESKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSDFTPCSGGGSEVEGEQAKHSSFNNNGDSAHSFTDLEE
VESRDREEDSVSEPSECPDPRPETPGITPEKKQKLFPLNSGNGPGYCPGCGETGCAAGRG
CSGKASASKDKRLGERGGGQEGVGSSVLAGNHETKPGQDGSGAPSKAKGVWGGGGGVETT
GQEGSSSFVGVAAETENKMSQGSASSSSSSNSQLLRPKQLQPEPPPVKPKLRAGRGEGNP
GVGGSGQTSSDLGERLIASVRRLAEQNRASALRGETRGGHKPLGLKEILVYLTSQDGLSS
EGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPTPAKPPGPANRLLKSALQD
KHIGNKEVKEEEPMETESGEEEEEDEEEKGTGDAEDGGQSDTQTSGGEEGSKGGTCPAPV
PMETEPRNGDDITGGSEGQAGVKQEDKQPEHTTNTDQIHTDTQDQNVVQSERESHTSSVH
NHNSGSACKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGSLNPVNWTVSDVV
CYFTTAGFAEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQRTHF
EEDD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtggccaacgcatgcgcacatcgaggcttccgttgttcattctccgctctgccgggct
cgctctctgctcgcgctgggtcggtataggagagcgacttacagcgtcacttcagaaaca
acaagagagaaaagacgcactcggccaaacccaaactcaaccgctgggaaaacaacaacc
acaatgtccgaatccaagtaccgggactggatcctcgagaccatcgactctctacgctca
cggaaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcg
gatccagacagaacccgagaggaactggagaaactgatccaggagcaaacagtgctcaaa
gttagctacaagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcga
aagaagagtgacttcacgccgtgtagcggcggcggtagcgaggtggagggagagcaagcc
aaacactccagtttcaacaacaacggggacagcgcgcacagctttaccgacctagaggag
gtggagagccgggaccgagaggaggattctgtctccgagccgagtgagtgccctgacccc
cggcccgaaaccccgggcatcacccccgagaaaaaacaaaagctttttccactgaatagc
ggaaacggccctggctactgcccgggttgtggcgaaacgggctgtgctgccgggagaggc
tgcagtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagaggaggaggtcag
gagggggttggcagcagcgttttggccggcaaccacgaaacaaaaccgggccaagatggg
agcggcgctccgagcaaagcaaagggggtctggggtggaggagggggggtggagacgacg
ggacaggagggcagcagtagcttcgttggtgttgctgctgaaacggaaaataaaatgagc
cagggaagcgccagttcaagttccagcagcaacagccagctcctgcggccgaaacagctt
cagccagaacccccacctgtcaaacccaaactgcgggccggacgaggtgaggggaacccg
ggggtcgggggcagcgggcaaaccagctcggatttgggcgaaagactgatcgcctccgtc
cgcagactagccgagcagaaccgagcctccgcgttaagaggggagacccgcgggggccac
aagccactgggactgaaggagatcctggtttacctgaccagccaagacggcctctcatct
gagggtaaactgacccgcaacagggtcaaggtggttctggagagagaggtggcgagaggt
cggctgcggaggacccggtgtgggaacatcactctcccggtgaggggagtggaggcagcg
ccaaccccagcgaagccacccggccccgctaacagactgctgaagagcgcactgcaggat
aagcacattgggaacaaggaggtgaaagaggaggagccaatggagacagagagtggtgag
gaggaggaggaggatgaagaggagaagggaacaggggatgctgaggatggggggcagagt
gatacccaaacctcagggggtgaggagggttctaaggggggtacttgccctgccccggtt
cccatggaaacggaacccaggaatggtgatgacatcactggaggttctgagggacaggcg
ggggtgaagcaggaggacaaacaaccggaacacacaaccaacacggaccagatacacaca
gacacacaggatcagaatgtggtacagtcagagagagagagccacacttcctctgtccac
aaccacaactcaggttcggcctgtaagacagaggtgggtgtgtcctcctgtctcctcacc
cccaccgcctcacctagagactctggcctggcagaggagagagggatgaacggaggagtg
tttgtgaagtctgagctgggcagtctaaacccagtcaactggacagtgtctgatgtggtc
tgttatttcacgacagcagggtttgcagaacaggctttagccttcaggactcaggagata
gatgggaagtccctcctcctgatgcagcgtaacgatgtcctgacaggcctgtcaatcagg
ctaggccccgccctgaagatctatgagcgccatgtgaaggttctgcagagaacacacttt
gaagaggacgactga
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