Oncorhynchus gorbuscha (pink salmon): 124002713
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Entry
124002713 CDS
T07892
Name
(RefSeq) B-cell receptor CD22-like isoform X1
KO
K06467
CD22 antigen
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124002713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124002713
04090 CD molecules [BR:
ogo04090
]
124002713
04091 Lectins [BR:
ogo04091
]
124002713
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
SIGLEC family
124002713
CD molecules [BR:
ogo04090
]
Proteins
124002713
Lectins [BR:
ogo04091
]
I-type lectins (Siglecs)
124002713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
V-set
I-set
Ig_5
Ig_CD22
Ig_4
C2-set_2
Izumo-Ig
FeoB_C
Motif
Other DBs
NCBI-GeneID:
124002713
NCBI-ProteinID:
XP_046166361
LinkDB
All DBs
Position
LG18:complement(4408261..4418395)
Genome browser
AA seq
570 aa
AA seq
DB search
MFPNDITKREGDATMALRTAGSVLVVLLWSVAETTATQCGQKIQVMVSPTNAVWGQKVTV
TCNTTCTLTDNPTYIWYMNGQHLSSSSKSTLSATSYHSASYSCAVKGFEDLLSPAVCVFG
HYCFNVTYTHHSICALKGSTVELPCTYRHPNIHNVLIATWYIQEKRDEVLNVLNLDRAEY
LKTPPKYLAIQEKDCTLKITDLRENDSAEYKFRFKTQHTEWGYSFPGTTLTVTGLQVKVT
PATEKGNLTLTCSTTCTLTDNPKPTYIWYKNGQHLTNSKTLDNSLILDPVSSEDAGRYSC
AVKGHNNLYTPEETLTVIYPPKNPSVSVSPSGEIVEGSSVTLTCSSDANPPVDKYTWYFQ
NETLINGFEQIYNITNFRSEDSGHYHCEAWNKMTSKNSTALIIITVKQTSVLTAAVGIIV
VVLVLILCLSGLMWFRKKASKPISDTRDTVDNRQGNSSLMNDNISGMAMTPTSVQRADTD
NQDDVHYTSIHFSGSNNQEVPLYSTVQLPQTQKEDEDVQYAVVKFKLPQCCPPDYTVPEE
GPQHHQGPHTPQPRAVHTLTVGLTVSENEV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgaatgacatcaccaaaagggagggtgatgcaacaatggccttgagaacagca
ggaagtgtgttggtggtccttctctggtctgtggcagaaactacggcaacacagtgtgga
cagaaaatccaagtgatggtgtctcccaccaatgcagtgtggggacagaaggtgacagta
acctgtaacaccacctgtactctgactgataaccccacctacatctggtacatgaacgga
caacatctatcatcgtcatccaagtccacattgtcagctaccagttatcattcagccagc
tactcctgtgctgtaaaaggctttgaggatctcctctctcctgcagtgtgtgttttcggt
cattactgtttcaacgtgacttacacccatcatagtatctgtgctttgaagggctcaaca
gtggaactgccctgcacatatagacacccaaatattcacaacgttttaatagcaacctgg
tatatccaagagaaacgcgatgaagtgctaaacgtcctgaacttggatcgtgctgagtac
cttaagacccccccaaaataccttgcgattcaagagaaggactgcaccctgaaaatcaca
gacctaagagagaacgattcagctgagtacaagttcagatttaaaacacagcacacagaa
tgggggtacagcttccctggaacaactctgactgtcacaggtctgcaggtgaaggtgact
cctgccacagagaaagggaatctgacactgacctgtagcaccacctgtactctgactgac
aaccccaaacccacctacatctggtacaagaacggacaacatctcaccaactcaaagact
ctagataactccctgatcctagacccagtcagcagtgaagatgcaggcagatactcctgt
gctgtaaaaggccataataatctctacactcctgaagagactctgactgtcatttatcct
ccaaagaacccctcagtgtcagtcagtccctctggtgaaatagtggagggcagttcagtg
actctgacatgcagcagtgatgccaacccacctgtggacaaatacacctggtactttcaa
aatgagactttaataaatggattcgaacagatctacaacatcaccaacttcaggtctgaa
gacagtggacattaccactgtgaggcctggaataaaatgacatctaagaactctacagct
ctgatcattataacagtgaaacaaacatcagttctgactgcagctgtaggaatcatagtg
gttgttctggttctcatcctctgtctctctggactcatgtggttcaggaagaaggcttcc
aaacccatctctgacacaagggacacagtagacaatagacagggaaactctagtctcatg
aatgacaacatatcgggcatggccatgacccctacttcagtacagagagcagacacagac
aaccaggatgacgttcactacaccagcatccacttctctggctccaataaccaggaagtg
cctctgtactccactgtccaactgcctcaaacccagaaagaggatgaggatgtccaatac
gctgttgtaaaattcaaactgccccagtgctgcccccccgactatacggtgcctgaggaa
ggcccccagcatcatcaaggaccccacacaccccagccacgagctgttcacacacttacc
gtcgggctgacggtatcagagaatgaggtctaa
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