Oncorhynchus gorbuscha (pink salmon): 124002952
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Entry
124002952 CDS
T07892
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43-like isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124002952
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124002952
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124002952
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124002952
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124002952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124002952
NCBI-ProteinID:
XP_046166766
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Position
LG18:12182243..12307297
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AA seq
1280 aa
AA seq
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MDNHKESKTRKQSMKTKSTKRKEKKYKAGKLFRRKSLKSVGNFMSRILKTLGTLAHFGDV
EPPDGEDDDGGFRDSAACTLSANSGNFNTDELRVSREIKVKKSASTLSPHGSIKDRLSWC
YGDKTPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDLCQGRVNGIVKNEDA
QLARGEVTTQLASLVRALWTLEYTPQLSVEFKSIVSKYGSQFRGNSQHDALEFLLWLLDS
VHEDANPTTNNNHSGSKTKANGKGLLGGAEESPVSGPAAAHQPRMRHSFVQDHFQAQYRS
SLTCPHCLKQSNTFDPFLCISLPIPLRQTRCMSVTLVFSTKGQRYLRVGLAVPLIGSISC
LRAMVAEEGKTTPDQVVLSELYATGFQRSFSDDDDLTSVAESDVVYAFQAPPLHTRAGST
RMSGFHHSLPSSPYTSGPEGQRLPPSTTLSSEFLNHGGSTKVLLVICNTAGSGQQAVRFG
PPFLMREERTLSWDQLQQSILSKLYYLMLNGSQAQNAGLLFKVRVVGGSASYSYLSPQDG
RPLFHPAVDRALKLCGPGGPPHVKLVIEWEHKIKECLFGNIQEEVVKDSESVRVQQQQHL
QQHSCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQV
GERRNKLSTQVRFPLAGLDMAPHVVKRSQSMRNLGDLGPWPPTWKQPEGSSHHISHPDMA
LPPDFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGAYIL
FYQRRNVIPPWSASSSIRGSTSSSMSDHWLVRLNGDSKRGSLVSRSSTTCPSSVHDSPES
PVFLDDPPREEEGEGPGKHEMHGKPKKGGFETRPFVRGIQGRSVSMRTPTKNKETLNKVF
PLRWSFGSKDRQNIAAEAAPAPIPTPAPVELVEYLESGRRPRCTKDSIVNLMTGSESRKG
PAISSPSVGSSLNCMGQSESPQMPEGQRKPVTDKTGSLRRSSKGSHQQQRDQGDQRDQGD
QRDQRDEGRMGSSSSTNTLTRRNTKKSKEKDQGKPQEAPSRRGSSAGVQSSSSTHSLRDR
DWEGTLRRGAKGHQDPPPRDCLVPPEGEKRRKGEKVEEASKSHEGLLSFFKSNFKKKDKE
SSSSRKSDSGKVGDVGGSSTSQLSLSSGAPGGATKTGEAKSNGAPRNGSANHLGDELPNG
KARRAAAAHIKRSQSSSNIPSKEESSMRRTASLHRKGLSHDVAPPPRSLTAETPSYGTLQ
RTRYSTNSLGRKRTVPESSF
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggataaccacaaggagagtaagacgaggaaacagtcaatgaaaaccaaatctacaaaa
cgcaaagagaagaaatacaaagccgggaagcttttcaggaggaaatcgttgaagtccgtt
gggaattttatgagcaggatactgaaaactttgggaactttggcacactttggcgacgtc
gagccacctgacggcgaggatgatgatggcgggttcagagacagcgccgcgtgcacgttg
agtgccaactcagggaattttaatacagatgaacttcgggtctcgagggagattaaggtg
aagaagagcgcttcaactttgtctcctcatggatctataaaagacaggctgtcgtggtgc
tatggcgacaaaactcccggagtccttgggttgaagaatcatggaaacacttgtttcatg
aatgcggtggttcagtgcctcagtaatacggacctgctggccgagtaccttggtttggaa
caatacaagtctgatttgtgtcaggggagagtaaacggaattgtaaaaaacgaggacgcg
caacttgccaggggtgaggtgaccacacagttggcatccttggtgcgggcgctttggacc
cttgaatatacacctcaactgtccgtggaattcaagagtattgtgtccaagtacggctct
cagttcagagggaactctcagcacgatgccctggagttcctgctctggctcctggacagc
gtccatgaggatgccaaccccaccaccaacaacaaccacagcggcagcaagaccaaagcc
aacggaaagggcctgctgggtggagcggaggagagccctgtctccggcccagcagcagca
catcagcctaggatgcggcacagcttcgtccaggaccactttcaggcacagtacaggtcc
tccctgacatgtccacattgccttaaacagagcaacacctttgaccccttcctctgcatc
tcactgcccattcccctgcggcaaaccaggtgtatgagtgtgaccctggtgttcagtacg
aagggtcagaggtatctacgtgttggtctggctgtgcctctcatcggctccatctcctgc
ctgcgtgccatggttgctgaggagggcaagaccacgccagaccaggtggtcctgtcagag
ctctatgccaccggcttccagcgttcgttctctgacgacgacgatctgaccagcgttgct
gagagtgatgtggtctatgccttccaggctccgcccctccacacacgggcaggctccacg
cgaatgtcgggcttccaccacagcctcccatcctcgccatacacctcagggccagagggt
caaaggttacccccatcgaccactctgtcctcagagtttctgaaccacggtggctccacc
aaggtcctcctcgtaatctgcaacacggcaggctccggccagcaggctgtcaggttcggc
cctcccttcctcatgagagaggagcgtaccttgtcctgggaccagctccagcagagtatc
ctcagcaagctctattacctgatgctgaacggatcacaggctcagaatgcagggttgctg
ttcaaggtcagagtggtgggaggatctgcctcctacagctacctgtccccacaagatgga
cgccctctcttccaccctgccgtggacagagccctgaagttatgtggcccaggaggacca
ccccacgtgaagctggtgattgagtgggaacacaagatcaaagaatgtctgtttggtaac
atccaggaggaggtggtgaaggactcagagagtgtgagagtccagcagcagcagcacctg
cagcagcacagctgtaccctggacgagtgctttcagctctacaccaaagaggaacagctg
gccccagacgacgcatggaagtgtccccactgtaagcagctccagcagggcatggtgaag
atgtccctttggaccctccccgacatcctcatcctccacctcaaacgcttccgacaggtg
ggcgagcggcgcaacaagctgtccacccaggtgcgcttccccctggccgggttggacatg
gccccccacgtggtgaagaggtcccagagcatgaggaacctgggggacctgggaccctgg
ccccccacatggaaacagcctgaaggcagcagtcatcatattagtcacccagacatggcc
ctgcctcctgacttcctctatgacctctatgcagtgtgtaaccaccatggtgggatgcac
ggcggacattacacagcgtactgcaggaactcagtggacggccagtggtacagctatgac
gacagcagtgtggacctggtgcctgaggaggaggtgtgtaccaggggggcctacatactg
ttctaccagagacgtaacgtcatccccccctggtccgccagcagctcaatcagaggctcc
accagttcctccatgtcggaccactggctggtccgtctgaatggggacagtaagaggggt
agtctggtgtcccgctcctccaccacctgcccctcctctgtccacgactccccggagtcc
cccgtcttccttgatgacccacccagagaggaggaaggtgaggggcctgggaaacatgag
atgcatggtaaaccaaagaaaggtggttttgagaccaggccgttcgtacggggcatccag
ggtcgtagcgtcagcatgaggacccccactaagaacaaagagacactgaacaaggtcttc
ccgctacgctggtcgttcggctccaaggaccgccaaaatattgcagccgaggccgcccct
gctcccatccccacccctgcccctgtggaactggtggagtacctagagtctggaagaaga
cctcgctgcaccaaggactctatagtcaatttaatgacgggctctgagagccggaagggt
cctgccatcagctcccccagtgtgggaagcagcctgaactgcatgggacaatcagagtct
ccgcagatgccagagggccagagaaaaccagtcacagacaagacagggagtctgagacga
agtagcaaagggtcccatcagcagcagagagaccagggggaccagagagaccagggggat
cagagagaccagagagacgagggtaggatgggcagtagtagtagtactaacactctgacc
aggaggaataccaagaagagtaaggagaaggaccagggaaagccccaagaggccccttct
aggagggggtctagtgcaggcgtccagtccagctccagcacccacagcctcagggacaga
gactgggaaggcaccctgaggagaggggccaagggccaccaggacccaccaccaagggac
tgtctggtaccacctgagggagaaaagagaaggaagggtgagaaggtagaggaggcctcc
aagagccacgaggggctgctgtctttcttcaaaagcaacttcaagaagaaggacaaggag
tcgtcatcgtctcgcaagtccgactctggaaaagttggtgacgtcggcgggtccagcacc
tcccagctgtccctgtccagtggagccccaggcggggccacgaagacgggggaggcgaaa
tccaacggagccccccgcaacgggagtgccaatcatctcggagacgagctacccaatggt
aaagccagacgcgccgctgctgcccatataaaacgctctcagagctcatccaacatcccc
agcaaggaggagtctagcatgcgaaggaccgcctctttacaccgcaaagggctgtcccat
gacgtggctccgccccctcgcagcctcacagcagagacgccctcctacggtaccctgcag
aggactcgctatagtaccaactcattgggacgcaagaggacggtcccagagtccagcttt
tag
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integrated database retrieval system
