Oncorhynchus gorbuscha (pink salmon): 124002974
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Entry
124002974 CDS
T07892
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124002974
03037 Cilium and associated proteins [BR:
ogo03037
]
124002974
Transporters [BR:
ogo02000
]
Other transporters
Pores ion channels [TC:
1
]
124002974
Cilium and associated proteins [BR:
ogo03037
]
Other cilia and associated proteins
Stereociliary proteins
124002974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
124002974
NCBI-ProteinID:
XP_046166800
LinkDB
All DBs
Position
LG18:7586583..7619195
Genome browser
AA seq
1068 aa
AA seq
DB search
MSHYNNTGGYNNPAYHDSDTLEIDRSPSRKSQSHHSNPHGNPYPRDDGAGGERGRSDLQQ
LPGGVQSSYDDAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIDQ
ATHYDTTPPVRLPSATSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEQN
LVQELVAMSTRDRIKAIRDLPMSFVDKKHIRGQVLALKSFKKSRQLNCFADCSKTVSLAF
HRCGANMTLAKQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIP
QLIYHPTPDIPAGVSFKGLEILTGAGYFSHTVMYYGGYSNKTQGTGGRSEYNMQLAYFFT
IAAYMVLCGAALIYSMASSFRKKYVLADSGLGGAWQLLCSWDFSVTNEKAVRQRKNNLRI
QLKVTFTVISETRTKSCESLSEKVQVALLPLTERLKHYGVFLGTWLLSTGMALGCGASVY
FLCQYDTWRTRQSADKASGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQ
VYAIIVRNVILKMSILGILCYYWMKDVANTFSCWESIVGQALYRLVIMDFLFIMLGSFFG
EFLSNVIGTKFIQSLGVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYL
KKVSLTQNCQPPRRAGRAAQMQTIFIAILFFPSFVGALSMVAYTVWTLPPSDKCGPFRGL
NTTFSAIQIWMDDLNRVDAFRWTVWIYQHVIRSEIFYFLVSLIILVFIYIFRQITQGRQL
LITLLRQQIVNEGKDKAFLLEKLQNLQKSKQNKQKKKKQVRKRPENESSSGMLQALIARQ
RLEQENGGSSSFGVPMPSGHSISTTSSAMMQAMLARQYAEDQDVASYRGVPFPADQTPAP
SSALIQAMQARQRVESQNEDEFYRAPVQSQNPVNTLPSAMIQVMQARQRAESEQEEDKFY
RAPVQSQNPVNALPSAMIQVMQARQRAESEQEEDQFYRTPVHSEHPVSSTPSAMMQVMQA
RQRAEEEESEFYRAPASSQHPDASGTGSALIQAMLARQQVEEEYGDRY
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactacaacaacactggaggatataacaaccctgcctatcatgacagtgacacc
ctggagatagataggagtccttctaggaaatcccaatcccatcacagtaacccacatggt
aacccctaccccagggatgatggagccgggggtgagaggggcaggtctgaccttcagcag
cttccaggaggggtccagtccagctacgacgatgcccaggagagagtgccctggggcggg
tggcaggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccgg
tcggagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgatcag
gcaacgcattatgacacaacgcctcctgtacgacttccatctgcaacttcaggtcatgtt
tcgatgaggttcagggggtcgaggaagatgagtctattccctgtaggagaggctgctctg
ggcaatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacagaac
ttggtccaagagctggttgctatgtcaacgagggacagaatcaaggccatccgagacctc
cctatgagctttgttgacaagaaacacatcaggggccaagtgttggcgttgaaatcattc
aaaaagtcccggcaactgaactgctttgcagactgttcaaagactgtctcactggcgttc
cacaggtgcggtgctaacatgactttagccaagcagaccctggaactgtggcggggtacc
atgaaggaggtcgggggtaaatttggcacgggggtcctctcctacttcaagttcctaaaa
tggctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccc
cagctcatctatcaccccacgccagacatccccgctggggtcagcttcaaagggctagag
atactgaccggagcgggttatttcagccacacagtgatgtattatggcggctacagtaat
aaaacacaagggacagggggccggtctgagtacaacatgcagctggcctacttcttcacc
atagcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcgttc
aggaagaagtatgtccttgcagactcaggcttgggtggcgcctggcagctcctgtgtagc
tgggacttcagtgtgactaacgagaaagccgtacgacagcgcaagaacaatctgcgcatc
caactcaaggtcactttcactgtaatctcggaaaccagaaccaaatcttgtgagtcctta
tcagaaaaggtccaggtggccctgctacctctgacagagaggctgaagcactatggggtc
ttcctgggtacctggctcctctccacgggcatggccttgggctgtggcgccagtgtctac
ttcttgtgtcaatatgacacatggcggacgaggcagtcagcggacaaagcttccggctct
ctcctggaggaggccgctactctcctcctcccctttgtggtgtccctgatcaatctggtc
gtccctctcttctactctctgttcaaaaagatagagcactactccaaccctcgcatgcag
gtctatgccatcatagtcagaaatgtcattctcaagatgtccattctgggtattctctgc
tactactggatgaaggatgtggccaatacattttcatgctgggagtccatcgtaggacaa
gccttgtacagactggttattatggacttcctcttcataatgttaggatccttctttgga
gagttcctgagcaatgtcattgggactaaattcatacagagcctgggagttccagagttt
gacgttgccaggaatgtccttgacctgatctatgcacagaccctggcatggatcggaatc
tacttctctcccctcctcccagtgatacagataatcaagttcttcatcctcttctaccta
aagaaggtcagcctgacccagaactgccagccccccaggcgagccggcagggcggctcag
atgcaaaccatcttcatcgctatcctcttcttcccttccttcgtgggggctctgtccatg
gtggcctacaccgtgtggactctgcccccctcagacaagtgtgggcccttcaggggcctc
aacaccaccttcagtgcaatacagatctggatggacgatttgaacagggtggatgcgttt
cggtggactgtctggatctaccagcacgtcatcaggagtgagatattctacttcctggtc
tctctcatcatccttgtcttcatttacatcttcaggcagatcactcagggacgccagctg
cttatcactctactgaggcagcagattgttaatgaagggaaggacaaggcgttcttgttg
gagaagctacagaaccttcagaaatccaagcagaacaaacagaaaaagaaaaaacaggtc
aggaaaagaccggaaaatgaatcctcctctggcatgctccaggctctgattgcccgacag
cggttggagcaagagaatggtggcagcagctctttcggtgtgcctatgccttccggccac
tcaatctccacgacatcgagtgctatgatgcaggccatgctagccaggcaatacgcagag
gaccaggatgtagccagttatcgcggggtgccatttcctgcagaccaaacacctgcgccc
tccagtgcactgatacaggccatgcaagccaggcaaagggtggagtcacagaatgaggac
gagttttaccgggcgccagttcagtcacagaacccagtaaacacgttacccagtgcgatg
atacaggtgatgcaagccaggcagagggcggagtcagagcaggaagaagacaagttttac
cgggcgccagttcagtcacagaacccagtaaacgcgttacccagtgcgatgatacaggtg
atgcaagccaggcaaagggcggagtcagagcaggaagaagaccagttttaccggacgcca
gtacattcagaacacccagtgtcatcaacacccagtgcgatgatgcaggtcatgcaggcc
aggcagagagcagaggaggaggagagcgagttttaccgggcgcctgcttcttcacagcac
ccagatgcgtcaggcaccggtagtgctctgatacaggctatgctagcccggcaacaggta
gaggaggagtacggtgacagatactga
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integrated database retrieval system
