Oncorhynchus gorbuscha (pink salmon): 124003001
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Entry
124003001 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 3-like isoform X1
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124003001
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124003001
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
PH_5
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
124003001
NCBI-ProteinID:
XP_046166847
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Position
LG18:70376818..70514784
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AA seq
580 aa
AA seq
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MNSNHMQTSDGNKDVSGPTLQKKSCFSLLPSPDSWMFRGKKRKQMRDVDSLSLCSLDINE
PSNKRVKPLSRVTSLANLIPPVKTAPLKRIGQTLQRSISFRSESRTETVMPPRPWTRPAP
PANTKRRDSKLWSETFDVRLGHQMLSSKEIKRQEAIFELSQGERDLIEDLKLAKKAYHDP
MLKLSIMTEHELTQIFGTLDSLIPLHEDLLSRLREARKPDGSTETVGHILVDWLPCLDSY
NSYCSNQVAAKALLDHKKQDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLR
EILKHTPNDHLDRQHLDEAINMIQSIVAEINTQTGESECRFYKERLLYLEDRQRDLLIDS
SHILSCHGELKNNRGAKLHVFLFQDVLVITRAITHSEQLHYQLYRQPIPVRELQWEDLQD
GEIRLGGSIRGAFSNNERTKNFFRVSFHSGGQLQSHSFQASDAFNKQQWLNCIRQAKGAS
ESAVGVGIPVGVGTSSSDPEPRPSLLSPQRPLSPTTPPLSRALSPQPESMDHNDSDSFVD
SPDCSMDMDTAEASNSTTGWPGSAQMDQTDSSSSSRPAEV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaactctaatcacatgcaaacaagcgatggaaacaaagacgtttcagggccgacgctg
caaaaaaagagctgcttctctctgcttccctcacctgacagctggatgttcagagggaag
aagaggaaacagatgagggatgtggactctctcagcctgtgcagtctggacatcaacgag
cccagtaacaagcgggtgaagcccctgtcccgcgtcacctcgctggccaacctcatacct
ccagtcaagactgctcctctgaagcgcattggacaaacactgcagcgttccatcagcttc
cgcagtgagagccggacggagacggtcatgcctcctcgaccgtggacgcggccggctccg
cctgccaacaccaagcggcgagacagcaagctgtggagcgagacctttgacgtgcggctc
ggacaccagatgctgtcctctaaggaaatcaaacgccaggaggccatctttgagctttct
cagggcgagcgggatctcattgaggatctgaagctggccaagaaggcgtaccatgacccc
atgctgaagctgtccattatgacagagcatgaactcacccagatcttcggaaccctggac
tccctcattccgttgcatgaagatctgctgagtcgattgcgagaggccaggaaaccagac
ggctctacagaaactgtgggacacattctagtggactggttaccatgtctggactcctac
aactcatactgcagtaaccaggtggcagccaaagctctgctggaccataagaagcaggat
caccgggtacatgacttcctgcagcgctgcctggagtcgccctttagcaggaagctggac
ctgtggaacttcctggatatacccaggagccgtctggtcaaataccctctgctgctcagg
gagatcctcaaacacacacctaacgaccatctggaccgtcaacacctggatgaggcaatt
aacatgatccagagcatcgtggctgagatcaacacccagacgggtgagtctgagtgtcgt
ttctataaggagcgtctcctctatctggaagacaggcagagagacctgctcattgacagc
tcccacatcctcagctgtcacggggaactgaagaacaacaggggcgctaagctgcatgtg
ttcctgttccaggacgtgctggtcataaccagggccatcacccacagcgagcagctgcac
taccagctgtaccgccagcccatcccagtcagagagctgcagtgggaggacctgcaggac
ggggagatccgtctggggggctccatcagaggggccttcagcaacaacgagaggaccaaa
aacttcttcagagtgtcgtttcatagtggcggccagctccagtcccactcgttccaagcc
agcgatgccttcaacaaacagcagtggctcaactgcatccgccaggccaaaggagcctct
gagtcggccgtgggggtggggattcctgtaggggtgggaaccagtagcagtgacccagaa
ccccgtccaagcctactcagcccccagagacctctgagtcctacaacacctcccctctca
agagcactgtccccccagccagagagcatggaccacaatgacagtgactcgtttgtagac
tctccagattgtagcatggacatggacacggccgaggcttctaactccaccacaggctgg
cctggctctgcccagatggaccaaacagactctagtagcagcagcaggccagcagaagtg
tga
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