Oncorhynchus gorbuscha (pink salmon): 124003023
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Entry
124003023 CDS
T07892
Symbol
ptprt
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124003023 (ptprt)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124003023 (ptprt)
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124003023 (ptprt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
MAM
fn3
DSPc
Y_phosphatase3
ig
TM_ErbB1
Ig_2
Pur_ac_phosph_N
I-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
124003023
NCBI-ProteinID:
XP_046166903
LinkDB
All DBs
Position
LG18:31940897..32355979
Genome browser
AA seq
1503 aa
AA seq
DB search
MDKGNYIIASLLFQLMDLICGQLFPGSCSFEEHYSSCGYSVALGTNGFAWEQVNTWERPT
MDVAVPTGSFMVVNGSGRASGQKAHLLLPTLKENDTHCIDFHYSLSSRDGSSPGVLNVYI
KVNGGTQGNPVWNASASVTEGWVKAELAISTFWPNSYQVIFEAISIQGHPGFIAVDEVRV
LAHPCRKAPHFLRLQNVEVNVGQNATFQCTAGGKWSQHDQLWLQQWNGKDTALMVTRVVN
HRRFSATVSVGDTSQRSTSRYRCVIRSDGGSGVSNYAELIVKAPPTPIAPPELLAVGATY
LWLKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDAPTYKLWHLDPDVEYEIKVLLTR
PGEGGTGPPGPPLITRTKCADPVHGPQNVNVVDIRARQLTLQWETFGYAVTRCHSYNLTV
QYQYVFNQQEFAAEELIQTSSHFTLRGLRPFVTVRLRLVLANPEGSKESEEIVKQTEEDV
PGSVPLESIQTGPYEEKIFMQWKAPNETNGVITLYEITYKALSSLDPSADLTTQRGRVFK
LRNETQHLFVGLYPGTTYFFTLKASTNKGFGPPVTTRIATKIAAPSMPEYETDIPPLNET
DTTITVLLKPAQSRGAPVSVYQLVVKEERKQKVRRAADVLECFSVPVSFKNASILDLPHY
FAAELPPTYLTVVQPFSVGDNKTYNGYWNPPLSPAKSYSIYFQALSKANGETKINCVRLA
TKVVIGRGQNTTPYILVIPSEGASTQDSDAVEPEKQVDSTVKMAGVIAGILMFIIILLGV
VLTFKRREIHTWRTLSVGKLAKKQKETASSSSTQREMGLVSTADKSTTKVSTLHKDDPFS
TSSQDINGFTSPSPCSFSLQGKTLQCKSLLNSYYSVSKEPVPATASIDSSHSEMAQPSLT
IQTYPYGGCESVEMSYQAGQFQPAIRVADLLQHITQMKCGQGYGFKEEYEVRMGLTEGQA
APWETAKKDDNRNKNRYGNIIAYPTDDHTRVRLQLLDGDPHSDYINANYIDGYHRPRHYI
ATQGPMQETVRDFWRMIWQENSGSIVMVTNLVEVGRVKCVRYWPDETEVYGDVKVTLIET
EPLAEYVIRTFTVQKKGHHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPDAG
PIVAHCSAGAGRTGCFIAVDIMLDMAENEGVVDIFNCIRELRSQRVNMVQTEEQYVFVHD
AILEACLCGNTAIPVCEFRAIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSVGL
LPRNHDKNRSMDVLSVDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTVA
DFWRLVFDYNCSSIVMLNEMDAAQLCMQYWPEKSSCCYGPIQVEFISADIDEDIINRIFR
ICNMARPQDGYRLVQHFQFIGWPAYRDTPLSKRSILQLVRRLAKWQEQYDGGDGRTVVHC
LTGGGRSGTFCAICSISEMIQQQNIVDVFHTVKTLRNNKSNMVETMEQYKFCYEVALEAL
SAF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagggaactatatcattgcttcgcttctttttcaactgatggacttaatatgc
ggacaattatttccaggcagctgttcgtttgaagagcactacagcagctgtggctacagt
gtggccctggggaccaatggcttcgcctgggagcaagtcaacacttgggagaggcccact
atggacgtggctgttcccacaggttctttcatggtggtgaacggctcgggccgggcgtcg
gggcagaaggcccacctgctcctacccaccctgaaggagaatgacacccactgcattgac
ttccactactctctatccagccgcgatggctccagtcccggggtgctcaacgtctacatc
aaggtgaacggcggcacccagggaaaccctgtgtggaatgcctccgcctcggtgacagag
ggctgggtcaaggccgagctggcaatcagcaccttctggcccaactcctatcaggtgata
ttcgaggccatatccatacagggccatccagggttcatcgcggtggacgaagtccgagtt
ttggcccacccgtgccggaaagcacctcacttcctgcggctgcagaatgtggaggtgaac
gtgggccagaacgccaccttccagtgtactgctggggggaagtggtcccaacacgaccaa
ctgtggctacagcagtggaacggtaaagatacagccctcatggtgacgcgggtggtgaac
caccgacgtttctcagccaccgtcagtgtcggggatacgtcccagaggagcaccagccgc
taccgctgcgtcatccgctccgatggcggctccggggtttccaactacgctgagctcatc
gtcaaagctccccccacacctatagcccctccggagctcctggcggtgggtgctacctac
ctgtggctcaagcccaacgccaactctatcatcggggatggccccatcatcctgaaggag
gtggaataccgcaccactacaggcaactgggccgagacccacatcgtggatgcccccacc
tacaagctttggcatttggaccccgacgtggagtacgagatcaaggttctgctgacccgg
cccggcgaggggggcacaggacctccaggacctccgctcatcacccggaccaagtgtgct
gacccagtccacgggcctcagaatgtcaatgtggtggacattcgggcccgccagctcacc
ctgcagtgggagacatttggctacgccgtgacgcgctgccacagctacaacctgacagtg
cagtaccagtatgtgttcaaccagcaggagtttgccgccgaggaattgatccagacttca
tcccacttcaccctgcgtggcctgaggcccttcgtcactgtacgccttcgcctggtcctc
gccaacccagagggaagcaaggagagcgaggagatcgtcaagcagacagaggaggatgtt
cctggctctgttcctttggaatccatccagaccggaccgtacgaagagaagatcttcatg
cagtggaaggcacctaacgagaccaatggcgtcatcacgctctacgagatcacctataaa
gctctgagctccttggaccccagtgcagacctgaccacccagcgtggcagggtgttcaag
ttacgcaacgagacccaacacctgttcgtggggctctacccgggcaccacctacttcttc
accctcaaagccagcaccaacaaaggctttggaccccctgtaaccacccgcatcgccacc
aagatagcagccccatcaatgccggagtacgagacagacattccccctctgaatgagacg
gacaccaccatcacagttctgctgaagcctgcgcagtccagaggagctcccgtcagtgtc
tatcagctggttgtgaaagaggaacgaaagcagaaggtgcggcgggcggccgacgtgctg
gagtgcttctctgtcccggtcagcttcaagaatgcctccatcttggacttgccccactac
tttgcagcggagctcccgcctacatacctgactgtggtgcagcctttcagcgtaggtgac
aacaagacctacaatggctactggaacccccctctctcaccagccaaaagctacagcatt
tacttccaagccctgagcaaagccaatggggaaaccaaaatcaactgtgtgcgactggct
actaaagtggtaataggtaggggacaaaataccacgccgtacatacttgtcatccccagt
gaaggcgcgtccacccaggactcagacgctgtggagcccgaaaagcaggtggacagcact
gtcaagatggccggtgtcatcgcgggcattctcatgttcatcatcattctactgggagtg
gttctcaccttcaaacgcagagagatacacacatggagaactctgagtgtggggaaactg
gccaaaaaacagaaggagacagccagcagcagcagcacccagagggagatgggactggtg
agcacggctgataagagtaccactaaagtcagcactctgcacaaggacgaccccttctcc
accagcagccaggacatcaacggtttcacatccccctctccctgctccttctctctgcaa
ggcaaaacgctgcaatgcaaatccctcttgaattcctactactcagtgtcgaaggagcca
gtccctgcaacagcatccattgacagcagccatagtgagatggcccagccatcgttgacc
atccagacgtacccgtacgggggctgtgagtcagtggagatgtcctaccaggccggccag
ttccagccggccatccgtgtagccgacctcctccaacacattacccagatgaagtgtggc
cagggatacggctttaaggaagagtatgaggtaagaatgggcctgaccgaaggacaggcg
gccccatgggagaccgccaagaaggatgacaaccgcaacaagaaccgatatggcaacatc
atcgcttaccccacagatgaccacactcgagtcaggctgcaactgctggatggagacccc
cactcagactacatcaacgccaactacatagacgggtatcatagaccaagacattacatc
gctacacaaggccccatgcaggagacagtgagagatttctggagaatgatctggcaggag
aattccggcagtattgtcatggttaccaacctggtggaagtgggcagggtgaagtgtgtg
aggtactggcctgacgagaccgaagtgtacggagatgtcaaggtgacactgatcgagaca
gagccactggccgagtatgtcatccgcaccttcacagtacagaagaagggccaccacgag
attcgagagatccgtcagttccacttcaccagctggcctgaccacggggtaccctgctat
gccaccggcctcctgggcttcgtccgccaggtcaagttcctcaacccgcccgacgctggc
cccattgtggcccactgcagtgccggggctggaaggacaggctgtttcatagctgtggac
atcatgctggatatggctgagaatgagggagtggtggacatcttcaactgcatccgggag
ctgcgctcacaaagggttaacatggtgcaaactgaggagcagtatgtttttgtccacgac
gccatcctcgaagcctgcctgtgtggaaacacggccatcccagtctgtgaattcagagcc
atatactacaacatcagcagactggacccacagaccaactccagccaaattaaggatgaa
tttcagactctgaacatcgtgactccccgggtccggcctgaagactgtagcgtgggactg
ctcccccggaaccacgacaagaaccgcagcatggatgtcctgtctgtggatcgatgcttg
cccttcctcatctccgtggacggagagtccagtaactacatcaacgctgccctcatggac
agccataaacagccagcagccttcatcgtaacccagcacccactgcccaacacggtggcc
gacttctggaggctggtgttcgactacaactgctcctcgatagtaatgctcaacgagatg
gatgccgcacagttgtgcatgcagtactggcccgagaagagctcctgctgctatggcccc
atccaggtggagttcatctcagccgacatcgacgaagatatcatcaaccgcatcttcagg
atctgcaacatggccaggccccaggacggttaccgtttggtgcagcatttccagttcatt
ggctggcccgcttaccgcgacacgcccctgtccaagcgctctatcctgcagctggtgaga
cgtctggccaagtggcaggagcagtacgacgggggagacggacgcaccgtggtccactgc
ctgacgggtggtggacggagtggtaccttctgtgccatctgcagcatcagtgagatgatc
cagcagcagaacattgtagacgtgttccacaccgtcaagacgctgaggaacaacaaatcc
aacatggtggagactatggaacagtataaattctgctatgaagttgctctggaggccctt
agcgcattctga
DBGET
integrated database retrieval system
