Oncorhynchus gorbuscha (pink salmon): 124003029
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Entry
124003029 CDS
T07892
Name
(RefSeq) rab11 family-interacting protein 4A-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124003029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124003029
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124003029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_1
EF-hand_6
EH
EF-hand_8
Phage_DsbA
Motif
Other DBs
NCBI-GeneID:
124003029
NCBI-ProteinID:
XP_046166948
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All DBs
Position
LG18:complement(13043919..13154788)
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AA seq
685 aa
AA seq
DB search
MAPSVSVFKSGFQPQDNKLPMESVLPEAEQLLLFLRKLKEVFDLCDEDSDGYIRVEHFVN
LGSQFGQGDEVKTLAKCLDPNAQGRINFKDFCHGVLAIKGCEGVLKTTLGACSITQRPYE
TDNGYYYQRVDKALAHPVLMCTRVSLNPEPGCHLFPEGEEKGEVEGRERAELDMDSAVES
NPGSDVSEGGRSGGDKEDGLGGLFFPGDKCSQLNPSVTSDLSTRSSASLNEEQFEDYGEG
EDVDYTPSSPCPEDETRTNGYSDLGSSVPSSAGQSPRKTRHLYNNEMMDVYCSQCCKKVN
LLNDLEARLKNLKANSPNRKISSTAFGRQLLHTSNFSSSNGSTEDLFRDSIDSCDIDITE
KVSYLEKKVAELENDTLMNGDLKSKLKQENTQLVHRVHELEEQLKDQEAQAEQNTEEEQR
RHREAYSKMERDKNTELELLHNRVQQLEEENGDISVNMCRLKSQTEKLDEEKQRMTDKLE
DTSLRLKDELDLYRKMMDKLRQNRHEFQKEREAMQELIEDLRRELEHLQLFKLETEKPGH
GRSSSSGLTEFNAKTREMELEHEVKRLKQRFVSQDFPLTSDLRHLVVSAGARLRHGQTEN
LKLREQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDNASRDDLMEALKEQEEINFR
LRQYMDKIILSILDHNPSILEIKTN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctctgtttcggtgttcaagtcgggttttcaacctcaggacaacaaacttccg
atggaaagtgtccttcccgaagcggagcagctcctgctgttcctcaggaaactcaaagag
gttttcgacttgtgcgacgaggattcggatggttatattcgcgtggagcatttcgtaaac
ctcggttcacagttcggccaaggagacgaggtgaagacgttggccaaatgcttggacccc
aatgctcagggcaggatcaacttcaaggacttctgccatggagtgctggctatcaaaggc
tgtgagggggtcctgaagaccacactgggagcttgcagtatcacacagcgtccctatgag
accgacaacggttactactaccagcgtgttgacaaagcccttgcacatccggtcctcatg
tgcacgcgggtgtcccttaacccagagcctgggtgccatctattcccagagggagaggag
aaaggagaggtggagggcagagagagggcagagttagacatggacagtgctgtggagagc
aacccaggatcagatgtctctgaaggggggaggagtggaggagacaaggaggatggactg
ggaggacttttctttcctggagacaagtgcagtcagctaaacccatcggtgacctctgac
ctgtcgacacgttcctctgcctctctgaacgaggagcagtttgaggactacggagaggga
gaggacgtggactacactcccagcagcccctgccccgaggacgagacgcgcaccaacggc
tactctgacctgggctcctctgtaccctccagtgctggccagagccccaggaagacacgc
cacctgtacaacaatgagatgatggacgtgtactgttcccagtgctgtaagaaggtcaac
ctactcaacgacctggaggccaggctgaagaacctcaaagccaacagccccaataggaaa
atctccagcacagcctttggcaggcagctcctccacaccagtaacttcagcagcagcaac
ggcagcacagaggacctgttccgagatagcatcgactcctgtgacatcgacatcactgag
aaggtgagttacctagagaagaaggtagcagagttggagaatgacacgctgatgaacgga
gatctcaagtccaagctgaagcaggagaacacacagctggttcacagggtccacgagttg
gaggagcagttaaaggaccaggaggcgcaggcagagcagaacacagaggaggagcagaga
cgacaccgtgaggcctacagcaagatggagagagacaagaacactgagctagagctgcta
cacaaccgagtccaacagctagaggaggagaatggggatatatcggtgaacatgtgcaga
ctgaagtctcagacagagaaactggacgaggagaagcagcgcatgacagacaagctggag
gacaccagtctgaggctgaaggatgagctggacctctacaggaagatgatggacaagctg
aggcagaacagacacgagttccagaaggagagggaggccatgcaggagctgattgaggac
cttcgtcgggagctggagcacctgcagctgttcaaactggagacagagaagcctggccac
ggccgcagctcctcctctgggctgacggagttcaacgccaagaccagagagatggagctg
gagcacgaggtcaagagactcaaacagcggtttgtctcgcaggattttcctctgacctct
gacctccgccacctcgtagtatccgctggggcacgcctccgtcacggtcagacggagaac
ctgaaactgagagaacagaacgacgacctgaatggtcagatcctcagtctgagtctgtat
gaggctaagaacctgtttgccacccagaccaaggcccagtcgctggctgctgagatagac
aacgcctcacgggacgacttgatggaggccctcaaggagcaggaggagatcaacttccgc
ctgcggcagtacatggacaagatcattttgtctatcctggaccacaacccctccatattg
gagatcaagaccaactag
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