Oncorhynchus gorbuscha (pink salmon): 124003033
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Entry
124003033 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04137
Mitophagy - animal
ogo04144
Endocytosis
ogo04340
Hedgehog signaling pathway
ogo04350
TGF-beta signaling pathway
ogo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124003033
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124003033
04350 TGF-beta signaling pathway
124003033
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124003033
04137 Mitophagy - animal
124003033
09144 Cellular community - eukaryotes
04520 Adherens junction
124003033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124003033
04121 Ubiquitin system [BR:
ogo04121
]
124003033
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124003033
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124003033
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124003033
Autophagy
Mitophagy
Other mitophagy associated proteins
124003033
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
HECT type E3
124003033
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124003033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124003033
NCBI-ProteinID:
XP_046166955
LinkDB
All DBs
Position
LG18:complement(16040955..16122167)
Genome browser
AA seq
796 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNGSRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPEEAECLTVPKYKRDL
VQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGL
DYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGM
AVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVE
HNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQH
LLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEERRARLL
QFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEQYDKLY
DKLLTAIEETCGFAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacggacaccgtgaggaacacgctggaccccaagtggaaccaacattatgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcttgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgatggctgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccactcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtggtg
gatgagaacacgccggtcatgacacccaacggagcagccatcggtgtgctgcccagcagt
ggcagtgacccgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgccagagggatacgagcaaagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgaccct
cgagtgcccagggatctgagcaacgtcaactgtgaagagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacgggacgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccacgcctctccgccaacctccacctggtcctcaatccaaacggc
cctggtccaaacggttcccgcgtggccatggagagccagagccagaacactaacctcagt
agtcgtcagtcgaaccagttgaaggagcagcagccccccccgcaggtcccggcgttgtcc
ccggcccagctccccgaggaggccgagtgcctcaccgtgcccaagtacaagagggacctg
gtccagaagctcaagatcctccggcaggagctgtccaatcagcagccccaggcaggacac
tgtcgcatcgaggtctgccgtgaggagatctttgaggagtcgtaccgccaggtgatgaag
atgcgtcccaaggacctgtggaagagactgatggtcaagttcagaggagaggagggcctg
gactatggaggagtggccagggagtggctgtacctgctgtcccatgagatgttgaacccc
tactacggcctgttccagtactccagagacgacatctacaccctgcagatcaacccagac
agcgctgtcaacccggagcacctgtcctacttccactttgtgggccgtatcatgggcatg
gctgtgttccacggccactacatagacgggggcttcaccctgcccttctacaaacagctg
ctggggaaacccatcaccctggatgacatggagtcagtggacccggacctccacaacagc
ctggtctggatcctggacaatgacatcacaggggtgctggaccatacgttctgtgtggag
cacaatgcctacggagagatcatccagcacgaactgaagcccaacggcaagactgtctct
gtctctgaggacaccaagaaggagtatgtcaggctgtatgtgaactggaggttcctccac
ggcatcgaggctcagttcctggccctgcagaagggcttcaacgaggtcatcccacagcac
ctgctcaagtcctttgacgagaaggaactagagttgatagtgtgtggcctggggaagatc
gatatagcagactggaagagcaacacgcgcctgaagcactgcaccacggacagcaacgtg
gtcaagtggttctggaaggctgtggagtcctacgacgaggagaggagggccagactgctg
cagtttgttaccgggtcatctagagtcccactgcagggattcaaggctttacaaggtgcc
gcggggcccaggctgttcaccatccaccagatcgatgccaacaccaacaatctacccaaa
gcccacacctgctttaaccggattgacgttcccgcctacgagcaatatgacaagctgtac
gataagctgctgacagccatcgaggagacgtgtggctttgcggtggaatga
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integrated database retrieval system
