KEGG   Oncorhynchus gorbuscha (pink salmon): 124003071
Entry
124003071         CDS       T07892                                 
Name
(RefSeq) tubulin alpha-1C chain-like
  KO
K07374  tubulin alpha
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145  Phagosome
ogo04210  Apoptosis
ogo04530  Tight junction
ogo04540  Gap junction
ogo04814  Motor proteins
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124003071
  09143 Cell growth and death
   04210 Apoptosis
    124003071
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124003071
   04540 Gap junction
    124003071
  09142 Cell motility
   04814 Motor proteins
    124003071
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124003071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124003071
   03036 Chromosome and associated proteins [BR:ogo03036]
    124003071
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ogo04812]
    124003071
   04147 Exosome [BR:ogo04147]
    124003071
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124003071
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124003071
Cytoskeleton proteins [BR:ogo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124003071
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124003071
  Exosomal proteins of other body fluids (saliva and urine)
   124003071
  Exosomal proteins of colorectal cancer cells
   124003071
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 124003071
NCBI-ProteinID: XP_046167059
LinkDB
Position
LG18:42898400..42901748
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctcggtccatgtgggccaggctggagtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccaaccagatggcaagatgcccagtgacaag
accattggaggaggtgatgactcctttaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgatct
ggaatttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagatcatcgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
tttggaggtggcaccggttctggtttcacttccctgttgatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctccatatacccagctccccaggtatccacagct
gttgttgagccctacaactcaatcctgaccacccacaccaccctggagcattctgactgt
gctttcatggtagacaatgaggccatctatgacatctgccgtaggaacctcgatatcgag
cgtccttcctacaccaacctgaacaggttgatcagccagattgtgtcctcaatcactgct
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttcccccttgccacctatgccccagtgatctcagcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaatgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggtgacgttgtgcccaaagatgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggctgaggcttgggcccgccttgatcacaagtttgacctgatgtatgcc
aagcgtgcattcgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgctctggagaaagattatgaggaggtgggtgcagatagcgtg
gaaggagaggatgagggagaagagtactaa

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