Oncorhynchus gorbuscha (pink salmon): 124003082
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Entry
124003082 CDS
T07892
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124003082
03036 Chromosome and associated proteins [BR:
ogo03036
]
124003082
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124003082
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124003082
COMPASS/SET1 complex (yeast)
124003082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
124003082
NCBI-ProteinID:
XP_046167081
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All DBs
Position
LG18:60984682..60991900
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AA seq
571 aa
AA seq
DB search
MDSEVSDFEPAPGLESSMEGENAPVYCICRKPDINCFMIGCDNCNEWFHGNCINLTEKMA
KAIRQWYCLRCRDKNPSLEIKYRPKKSREKEAEGQREPERKFERQNSTPDYKSERRRGSK
VKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKMLRVKDE
EFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDDNMPWLSDEDDGPPFSPVLRKK
AVKVKHVKRRENKFDKKKESRRHKQKQKHKDKVRHSDRGDARDGGGQRQCLGPSCVEAAR
ANSKYCSEECGMKLATNRLYEILPQRIQQWQQSPCIAEEQGKKQLERIRRDQQNARMRLT
DMEKRFHELEGIIAKAKQQVVQQDEETNEGDNEETDLMIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPGDEVCG
CPLVRNVFEATGEYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTA
MTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtgtcagactttgagcctgctccagggcttgagagcagtatggagggc
gagaatgcaccagtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggt
tgtgacaactgtaatgagtggtttcatggtaactgcatcaatctcacagagaagatggcc
aaagctatcaggcagtggtactgcctgcgatgccgagacaaaaacccatcattggagata
aaataccgtccaaagaagagccgcgaaaaggaggcagagggccagagagagccagagaga
aaatttgaaagacaaaacagcactccagattataaatctgaaaggcgccgtggatcaaag
gttaagcgctctgctcgtatgtgtggagagtgcgagccctgcttgaggactgaggactgc
gccacatgcgacttctgcaaggacatgaagaaatttgggggtcccaacaaaataagacag
aagtgtcgatttaggcagtgtgacgtccgagccaggaaaatgttgcgtgtgaaggatgaa
gagtttaatttgcgtgaaaggcgggataattcctaccaccggagaagacgatattcagac
gactacgatagtgaggcagaactctatgaaaagtacaaggcagcgggatatgacgacaac
atgccatggctcagtgatgaggatgacgggccaccattcagccctgtcctgcgaaagaaa
gctgtgaaggtcaagcatgtgaagagacgggaaaataaatttgacaagaaaaaagagtca
cggcggcacaaacagaaacagaagcacaaggacaaagtcaggcacagtgataggggagat
gccagggatggaggagggcagcgacagtgcctcgggcccagctgtgtggaagctgcacga
gccaactcaaaatactgttcagaagaatgtggcatgaagctggctaccaaccggctctat
gagatactccctcaacgtatccagcagtggcagcagagcccctgcatcgctgaggagcag
ggcaagaagcaactggagcggatccgaagggatcagcagaatgcacgcatgcgtctcact
gacatggagaaacgcttccacgagctggagggaatcattgctaaggccaagcagcaggta
gtccagcaggatgaggagacgaatgaaggggacaatgaagaaacagacctgatgattttc
tgtgtgtcctgcagtcaccctatcaacccaaaggtggcactgcgacatatggagagatgc
tatgctaagtatgagagccagacatcttttggttcaatgtacccaacaaagatcgaagga
gcaacaagactcttctgcgatgtgtacaacccccagagcaaaacctactgcaagaggctt
caggttttgtgcccagaacattccagggacccaaaggtcccaggggatgaggtgtgcggc
tgtcctctggttcgtaatgtgtttgaggcaacaggcgaatactgcagggtttctaaacgc
aaatgtaataagcactacaactgggagaagctcaggagagctgaggtggacctggagcgt
gtcagagtgtggtacaagctggatgagctctttgagcaggagcgcaacgtcaggactgct
atgaccaacagggcaggtctacttgctctcatgctgcaccaaaccattcagcatgacccc
ctgacaacggatctccgttgcaacaaggacagatag
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