Oncorhynchus gorbuscha (pink salmon): 124003125
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Entry
124003125 CDS
T07892
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124003125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124003125
03041 Spliceosome [BR:
ogo03041
]
124003125
03032 DNA replication proteins [BR:
ogo03032
]
124003125
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
124003125
Spliceosome [BR:
ogo03041
]
Complex A
U1 snRNP components
Sm proteins
124003125
U2 snRNP components
124003125
Complex B
U1 snRNP components
124003125
U4/U6.U5 tri-snRNP components
124003125
Complex C
U2 snRNP components
124003125
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
124003125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
124003125
NCBI-ProteinID:
XP_046167144
LinkDB
All DBs
Position
LG18:complement(50054490..50058397)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVAT
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaagggcagaaggtccagaaggttatggtgcagccaatcaacctt
attttcaggtatctacagaatcgttctcggatacaggtgtggctgtatgaacaagtgaac
atgcggatagagggctgcatcatcggctttgacgagtacatgaacctggttctggatgac
gctgaggaggtccacatgaagaccaagaacaggaagcccctggggaggatcatgctgaaa
ggtgataacattaccttgctacaaagtgttgccacttaa
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