Oncorhynchus gorbuscha (pink salmon): 124003253
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Entry
124003253 CDS
T07892
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124003253 (lrrc29)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124003253 (lrrc29)
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
DUF7885
LRR_6
F-box
F-box-like
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_5
Motif
Other DBs
NCBI-GeneID:
124003253
NCBI-ProteinID:
XP_046167310
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All DBs
Position
LG02:complement(47013945..47019849)
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AA seq
644 aa
AA seq
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METPELPLEIVTYILSFLKASDRKEASLVCWSWYDASQDLQFQRNDTFKFPASISSLDLI
RGLSRRSRCSLVISHLDGSSMSRAVLQEIGLHLGPRLESLALPGSSVTESSLLALLPHLT
ALRRLDLRGLDSLFMSGAFLSKEEHRQQVGVALAGLEELDLSDLRYLSDLTFNRLTGCTL
RLRRLSLAGCHIAFEFDPYRGCPVGPDSSALLSLRNLRRLLQEQASTVRGLDLSRTSITP
ESLRSVAQVGGLSLEELRLRGCKELTDYSVEVLCKHQPGLRILDLSACTELTSRAVLAVA
LSLKGLRFLSLSRDWRMTDKGLADLMMLPELRNLDLSECLHVSGAEIVKGLSALEPRARL
ETLSFKSCTYIRDLAVFSLARLLGSSLRELDLTSCVYLTDLSVRAIATYLPGLVVLRLGW
CKEITDWGLLGMVELTKECEPSKEMEDKGPSFTRTFGNMGFFRPPSMPFQEKPRLVTDED
LGVFKEQDGSSLLALRSLQELDLSACSKLTDSSITQVLRYPDLQRLSLSMLPEISDDSLA
SVAYHCRSLTSLALSHCPKISDQGIARAAPYLARLQHLYLSCCDAVTDRSLSMLVQHCKR
LRTLDISMCKDISITTVDLLQSQLPFLENVHCRFVGGADLTLTL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcctgagttacctcttgagatcgtcacctacatcctaagtttcctcaaagca
tcagacaggaaggaagcctctctggtgtgctggagctggtatgatgcaagccaagacctc
caatttcagaggaatgacaccttcaagttcccagcctctatctcctccctggatctgatc
cggggcctgagtaggcgttcccgctgcagcctggtcataagccatctggatgggtccagt
atgtcccgggctgtgcttcaggagatagggctccatctaggccctcggctggagagcctg
gccctgccaggaagcagcgtgaccgagtcttccctcctggccctgctgccccacctgact
gccctgcgcaggcttgacctccgtggcctggacagcctcttcatgtctggagccttcctg
tccaaagaagagcaccgccagcaggtgggggtagctttagcaggtcttgaggagctggat
ctctctgacctgcgctatctatcagatctcactttcaaccgactcacaggctgcactctc
agacttcgccgtctctccctggccggctgccacatcgcctttgagtttgacccgtaccgt
ggctgccccgtggggcctgactcctctgccctgctctccctacgtaaccttcgcaggctg
ctacaggagcaggcctccaccgtgcgggggctggacctgagcagaactagcatcacccca
gagtcgctgcgctccgtggcccaggtagggggcctgtctctagaggagctgcgtctgcgg
ggctgcaaggagctgaccgactactctgtggaggtgctctgcaagcaccagcctggcctc
cggatcctggacctcagcgcctgtacagagctcaccagccgggctgtactggctgtggcc
ctgagcctgaagggcctccggttcctctctctgtcccgggactggaggatgacggataaa
gggctggccgacctgatgatgctgccggagctgaggaacctggatctgtctgagtgcctg
catgtcagtggggctgagatagtgaaagggctctctgctctggagcccagggcacggttg
gagacactcagcttcaagagctgcacctatattagggatctggctgtgttctctctggct
cggctgctgggctccagtttgcgggagctggacctcacctcctgcgtctacctcacagac
ctgagcgtgcgtgctatcgccacctacctgcccgggctggtggtgctacgactgggctgg
tgcaaggagatcacagactgggggctgctgggcatggtggagctcaccaaggagtgtgag
cccagcaaggaaatggaggacaaggggcccagcttcacccgtacttttggaaatatgggt
ttcttccggcctcccagcatgcccttccaggagaagccccggctggtgacggacgaggac
ctgggggtgttcaaggaacaggacgggtcctcactgctggccctcaggagcctccaggag
ctcgacctgtctgcttgttccaaactcactgacagcagcatcacacaggtgctgcgttat
ccagacctccagcgcctctctctctccatgctgcctgagatcagtgatgacagcctggcg
tcggtggcctaccactgccgcagcctcaccagcctggcactcagccactgccccaagatc
agtgaccagggtattgcccgcgccgccccctacctcgccaggctgcagcacctctatctg
tcctgctgcgacgcagtcacagataggtctctctccatgctcgtccaacactgtaagaga
ttgcggacgctggacatctccatgtgtaaagacatctccataacaacagtggacctcctc
caatcccagctgcccttcctagagaatgtccactgccgctttgtgggcggagctgacctg
accctcacactctga
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